Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 ID1-201ENST00000376105 1233 ntBASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT11Q9UKZ1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 AC068338.2-201ENST00000563278 1430 ntBASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 AC093503.3-201ENST00000624917 2352 ntBASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 NCF1B-203ENST00000435988 1254 ntBASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT11Q9UKZ1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 AC245052.3-201ENST00000450182 901 ntBASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT11Q9UKZ1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.08■□□□□ 0.65
CNOT11Q9UKZ1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 AC093484.2-201ENST00000580996 2166 ntBASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT11Q9UKZ1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT11Q9UKZ1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT11Q9UKZ1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT11Q9UKZ1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT11Q9UKZ1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms