Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 BX640515.1-201ENST00000617215 977 ntBASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
RIMBP3Q9UFD9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 MIR574-201ENST00000385209 96 ntBASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 NME4-212ENST00000621774 904 ntTSL 3 BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 AC131212.4-201ENST00000623606 975 ntBASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RIMBP3Q9UFD9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 AL645929.1-201ENST00000420084 975 ntBASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 TSPY17P-201ENST00000450329 467 ntBASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
RIMBP3Q9UFD9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 HLA-A-201ENST00000376802 1334 ntBASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC32.01■■■□□ 2.72
RIMBP3Q9UFD9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
RIMBP3Q9UFD9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC32.01■■■□□ 2.71
RIMBP3Q9UFD9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 AC008040.2-201ENST00000461049 708 ntBASIC32■■■□□ 2.71
RIMBP3Q9UFD9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 AL662844.1-201ENST00000546340 181 ntBASIC32■■■□□ 2.71
RIMBP3Q9UFD9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 AC140113.3-201ENST00000605663 199 ntBASIC32■■■□□ 2.71
RIMBP3Q9UFD9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC32■■■□□ 2.71
RIMBP3Q9UFD9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 AC010542.4-201ENST00000563151 1910 ntBASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 TSPY19P-201ENST00000418461 509 ntBASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 TSPY18P-201ENST00000441642 509 ntBASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC31.99■■■□□ 2.71
RIMBP3Q9UFD9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC31.99■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms