Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.88■□□□□ 0.93
DNMT3BQ9UBC3 REXO1L10P-201ENST00000615707 1290 ntBASIC20.88■□□□□ 0.93
DNMT3BQ9UBC3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DNMT3BQ9UBC3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
DNMT3BQ9UBC3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
DNMT3BQ9UBC3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.88■□□□□ 0.93
DNMT3BQ9UBC3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.88■□□□□ 0.93
DNMT3BQ9UBC3 AC079598.2-202ENST00000546624 1451 ntBASIC20.88■□□□□ 0.93
DNMT3BQ9UBC3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3BQ9UBC3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.87■□□□□ 0.93
DNMT3BQ9UBC3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
DNMT3BQ9UBC3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.87■□□□□ 0.93
DNMT3BQ9UBC3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.87■□□□□ 0.93
DNMT3BQ9UBC3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
DNMT3BQ9UBC3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
DNMT3BQ9UBC3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DNMT3BQ9UBC3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
DNMT3BQ9UBC3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 KRT8P9-201ENST00000558927 1449 ntBASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DNMT3BQ9UBC3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 KRT8P17-201ENST00000453110 1448 ntBASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.85■□□□□ 0.93
DNMT3BQ9UBC3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 AP000525.1-201ENST00000608286 694 ntBASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 CR392000.1-201ENST00000624770 1228 ntBASIC20.84■□□□□ 0.93
DNMT3BQ9UBC3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 UNC93B2-201ENST00000285383 730 ntBASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 RN7SL850P-201ENST00000579959 291 ntBASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 MIR6786-201ENST00000616843 113 ntBASIC20.83■□□□□ 0.93
DNMT3BQ9UBC3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DNMT3BQ9UBC3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
DNMT3BQ9UBC3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 AC007375.3-201ENST00000600936 2314 ntBASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 TMPOP1-202ENST00000424642 1267 ntBASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.82■□□□□ 0.92
DNMT3BQ9UBC3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms