Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 RAP2CP1-202ENST00000605179 643 ntBASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 AC003102.1-202ENST00000563394 1796 ntBASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 AC124067.4-201ENST00000519691 2379 ntBASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMCO4Q9NRQ5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SMCO4Q9NRQ5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 BICD1-207ENST00000551848 1962 ntBASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.67■□□□□ 0.1
SMCO4Q9NRQ5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMCO4Q9NRQ5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms