Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.35■□□□□ 0.37
ELL3Q9HB65 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ELL3Q9HB65 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 MYCNOS-205ENST00000641950 531 ntBASIC17.34■□□□□ 0.37
ELL3Q9HB65 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ELL3Q9HB65 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ELL3Q9HB65 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ELL3Q9HB65 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.33■□□□□ 0.37
ELL3Q9HB65 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ELL3Q9HB65 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
ELL3Q9HB65 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ELL3Q9HB65 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ELL3Q9HB65 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ELL3Q9HB65 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 AC007952.6-201ENST00000573168 2673 ntBASIC17.33■□□□□ 0.36
ELL3Q9HB65 AC003957.1-201ENST00000625108 2673 ntBASIC17.33■□□□□ 0.36
ELL3Q9HB65 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 AC092437.1-201ENST00000624794 1048 ntBASIC17.33■□□□□ 0.36
ELL3Q9HB65 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ELL3Q9HB65 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.33■□□□□ 0.36
ELL3Q9HB65 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 RNF165-205ENST00000588679 2904 ntBASIC17.32■□□□□ 0.36
ELL3Q9HB65 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 TCF3P1-201ENST00000423021 1937 ntBASIC17.32■□□□□ 0.36
ELL3Q9HB65 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ELL3Q9HB65 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.32■□□□□ 0.36
ELL3Q9HB65 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms