Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 AC121338.2-201ENST00000622535 1744 ntBASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.36■■□□□ 1.49
RTFDC1Q9BY42 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTFDC1Q9BY42 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 FEM1AP4-201ENST00000443167 1987 ntBASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 KRT8P17-201ENST00000453110 1448 ntBASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.34■■□□□ 1.49
RTFDC1Q9BY42 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 TSPY14P-201ENST00000303979 915 ntBASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 EGLN1P1-201ENST00000531623 762 ntBASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 AC006011.2-201ENST00000621313 1158 ntBASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
RTFDC1Q9BY42 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.33■■□□□ 1.48
RTFDC1Q9BY42 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 GRAMD4P8-201ENST00000605465 1115 ntBASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 DGCR10-201ENST00000609839 495 ntBASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
RTFDC1Q9BY42 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 B3GAT3P1-201ENST00000471720 806 ntBASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
RTFDC1Q9BY42 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC24.3■■□□□ 1.48
RTFDC1Q9BY42 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms