Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SEC22CQ9BRL7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 TSPY9P-201ENST00000440215 945 ntBASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 TSPY11P-201ENST00000442607 1045 ntBASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 AC020916.1-201ENST00000587762 1774 ntBASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
SEC22CQ9BRL7 AL390961.4-201ENST00000623958 2535 ntBASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 CROCCP3-202ENST00000420820 1947 ntBASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.81■□□□□ 0.28
SEC22CQ9BRL7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 MIR4787-201ENST00000607364 84 ntBASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 AP004607.4-201ENST00000530158 1459 ntBASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC22CQ9BRL7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC22CQ9BRL7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms