Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
NR1H4Q96RI1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 AP006587.3-201ENST00000525742 1516 ntBASIC18.75■□□□□ 0.59
NR1H4Q96RI1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 Z92544.1-202ENST00000571933 1220 ntBASIC18.75■□□□□ 0.59
NR1H4Q96RI1 AC087239.1-201ENST00000622671 572 ntBASIC18.75■□□□□ 0.59
NR1H4Q96RI1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H4Q96RI1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.74■□□□□ 0.59
NR1H4Q96RI1 AC068880.1-201ENST00000507289 2297 ntBASIC18.74■□□□□ 0.59
NR1H4Q96RI1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 AC010997.5-201ENST00000609182 354 ntBASIC18.73■□□□□ 0.59
NR1H4Q96RI1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H4Q96RI1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H4Q96RI1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms