Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCAB3Q8N7B9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 AC069152.1-201ENST00000438030 544 ntBASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
EFCAB3Q8N7B9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 MYCNOS-205ENST00000641950 531 ntBASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.69■□□□□ 0.74
EFCAB3Q8N7B9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 AP000974.1-201ENST00000623909 2387 ntBASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 AF201337.1-201ENST00000520239 748 ntBASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 DUX4L16-201ENST00000555130 1264 ntBASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 CFTRP2-201ENST00000634304 199 ntBASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFCAB3Q8N7B9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 KRT18P29-201ENST00000397031 1267 ntBASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 GUSBP6-202ENST00000438529 1198 ntBASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 AC004408.2-201ENST00000623613 2777 ntBASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EFCAB3Q8N7B9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms