Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
ABCA6Q8N139 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ABCA6Q8N139 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ABCA6Q8N139 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ABCA6Q8N139 HLA-G-202ENST00000376815 851 ntBASIC29.75■■■□□ 2.35
ABCA6Q8N139 HLA-G-203ENST00000376818 1127 ntBASIC29.75■■■□□ 2.35
ABCA6Q8N139 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC29.75■■■□□ 2.35
ABCA6Q8N139 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC29.75■■■□□ 2.35
ABCA6Q8N139 DBP-204ENST00000599385 709 ntTSL 3 BASIC29.75■■■□□ 2.35
ABCA6Q8N139 AC139887.4-201ENST00000607877 719 ntBASIC29.75■■■□□ 2.35
ABCA6Q8N139 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC29.75■■■□□ 2.35
ABCA6Q8N139 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC29.75■■■□□ 2.35
ABCA6Q8N139 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC29.75■■■□□ 2.35
ABCA6Q8N139 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ABCA6Q8N139 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ABCA6Q8N139 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ABCA6Q8N139 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ABCA6Q8N139 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC29.75■■■□□ 2.35
ABCA6Q8N139 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ABCA6Q8N139 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC29.74■■■□□ 2.35
ABCA6Q8N139 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC29.74■■■□□ 2.35
ABCA6Q8N139 CLN6-204ENST00000564752 900 ntTSL 3 BASIC29.74■■■□□ 2.35
ABCA6Q8N139 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC29.74■■■□□ 2.35
ABCA6Q8N139 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
ABCA6Q8N139 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC29.74■■■□□ 2.35
ABCA6Q8N139 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 BET1L-202ENST00000332865 533 ntTSL 5 BASIC29.74■■■□□ 2.35
ABCA6Q8N139 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC29.74■■■□□ 2.35
ABCA6Q8N139 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ABCA6Q8N139 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
ABCA6Q8N139 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ABCA6Q8N139 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
ABCA6Q8N139 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC29.73■■■□□ 2.35
ABCA6Q8N139 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC29.73■■■□□ 2.35
ABCA6Q8N139 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
ABCA6Q8N139 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC29.72■■■□□ 2.35
ABCA6Q8N139 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC29.72■■■□□ 2.35
ABCA6Q8N139 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC29.72■■■□□ 2.35
ABCA6Q8N139 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC29.72■■■□□ 2.35
ABCA6Q8N139 TPM4P1-201ENST00000436100 807 ntBASIC29.72■■■□□ 2.35
ABCA6Q8N139 BX664615.1-201ENST00000443558 458 ntBASIC29.72■■■□□ 2.35
ABCA6Q8N139 KRT18P16-201ENST00000510337 1294 ntBASIC29.72■■■□□ 2.35
ABCA6Q8N139 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC29.72■■■□□ 2.35
ABCA6Q8N139 TERT-206ENST00000508104 2486 ntTSL 5 BASIC29.72■■■□□ 2.35
ABCA6Q8N139 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC29.72■■■□□ 2.35
ABCA6Q8N139 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ABCA6Q8N139 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
ABCA6Q8N139 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
ABCA6Q8N139 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC29.71■■■□□ 2.35
ABCA6Q8N139 FAM207BP-201ENST00000447172 505 ntBASIC29.71■■■□□ 2.35
ABCA6Q8N139 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC29.71■■■□□ 2.35
ABCA6Q8N139 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC29.71■■■□□ 2.35
ABCA6Q8N139 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ABCA6Q8N139 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ABCA6Q8N139 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC29.71■■■□□ 2.35
ABCA6Q8N139 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
ABCA6Q8N139 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC29.71■■■□□ 2.35
ABCA6Q8N139 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC29.7■■■□□ 2.35
ABCA6Q8N139 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC29.7■■■□□ 2.35
ABCA6Q8N139 AP006587.1-201ENST00000534129 1502 ntBASIC29.7■■■□□ 2.35
ABCA6Q8N139 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ABCA6Q8N139 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC29.7■■■□□ 2.35
ABCA6Q8N139 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
ABCA6Q8N139 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC29.7■■■□□ 2.35
ABCA6Q8N139 TUB-203ENST00000534099 1759 ntTSL 2 BASIC29.7■■■□□ 2.35
ABCA6Q8N139 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
ABCA6Q8N139 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC29.7■■■□□ 2.34
ABCA6Q8N139 ANKRD20A18P-201ENST00000359341 492 ntBASIC29.7■■■□□ 2.34
ABCA6Q8N139 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
ABCA6Q8N139 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC29.7■■■□□ 2.34
ABCA6Q8N139 CD320-202ENST00000537716 1119 ntTSL 2 BASIC29.7■■■□□ 2.34
ABCA6Q8N139 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC29.7■■■□□ 2.34
ABCA6Q8N139 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC29.7■■■□□ 2.34
ABCA6Q8N139 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC29.7■■■□□ 2.34
ABCA6Q8N139 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
ABCA6Q8N139 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC29.7■■■□□ 2.34
ABCA6Q8N139 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
ABCA6Q8N139 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ABCA6Q8N139 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
ABCA6Q8N139 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC29.69■■■□□ 2.34
ABCA6Q8N139 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC29.69■■■□□ 2.34
ABCA6Q8N139 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
ABCA6Q8N139 RNF152P1-201ENST00000397754 604 ntBASIC29.69■■■□□ 2.34
ABCA6Q8N139 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC29.69■■■□□ 2.34
ABCA6Q8N139 MFAP1P1-201ENST00000442257 1255 ntBASIC29.69■■■□□ 2.34
ABCA6Q8N139 FAM86EP-206ENST00000510506 987 ntBASIC29.69■■■□□ 2.34
ABCA6Q8N139 AL121956.5-201ENST00000625261 221 ntBASIC29.69■■■□□ 2.34
ABCA6Q8N139 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC29.69■■■□□ 2.34
ABCA6Q8N139 MED25-212ENST00000618715 1467 ntTSL 5 BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms