Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 AC139713.2-201ENST00000641328 2723 ntBASIC17.49■□□□□ 0.39
LYSMD2Q8IV50 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD2Q8IV50 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LYSMD2Q8IV50 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 AC012313.1-201ENST00000593393 3059 ntBASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.46■□□□□ 0.39
LYSMD2Q8IV50 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms