Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 TREX1-205ENST00000625293 1783 ntBASIC20.53■□□□□ 0.88
CCDC25Q86WR0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC25Q86WR0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 AC142381.2-201ENST00000566120 298 ntBASIC20.52■□□□□ 0.88
CCDC25Q86WR0 CCDC92B-201ENST00000575506 885 ntBASIC20.52■□□□□ 0.88
CCDC25Q86WR0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
CCDC25Q86WR0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC25Q86WR0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.87
CCDC25Q86WR0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC25Q86WR0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CCDC25Q86WR0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 RBM17P2-201ENST00000616397 1405 ntBASIC20.51■□□□□ 0.87
CCDC25Q86WR0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC25Q86WR0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC25Q86WR0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC25Q86WR0 LINC02228-203ENST00000641970 1355 ntBASIC20.49■□□□□ 0.87
CCDC25Q86WR0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms