Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 AL121603.2-201ENST00000557373 2117 ntBASIC13.95□□□□□ -0.18
CSMD3Q7Z407 GALC-202ENST00000393568 2054 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 AC005332.1-201ENST00000577698 1310 ntBASIC13.95□□□□□ -0.18
CSMD3Q7Z407 AC011484.1-201ENST00000377652 1995 ntBASIC13.95□□□□□ -0.18
CSMD3Q7Z407 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSMD3Q7Z407 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 FAM86EP-206ENST00000510506 987 ntBASIC13.94□□□□□ -0.18
CSMD3Q7Z407 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 FSCN1P1-201ENST00000568912 1481 ntBASIC13.94□□□□□ -0.18
CSMD3Q7Z407 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 HCG4P8-203ENST00000443049 980 ntBASIC13.94□□□□□ -0.18
CSMD3Q7Z407 AC130371.2-201ENST00000619443 611 ntBASIC13.94□□□□□ -0.18
CSMD3Q7Z407 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSMD3Q7Z407 AL359075.1-203ENST00000462729 1002 ntBASIC13.93□□□□□ -0.18
CSMD3Q7Z407 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 AC093458.2-201ENST00000623150 629 ntBASIC13.93□□□□□ -0.18
CSMD3Q7Z407 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 LIN28AP1-201ENST00000429574 405 ntBASIC13.93□□□□□ -0.18
CSMD3Q7Z407 AL138966.2-201ENST00000621997 464 ntBASIC13.93□□□□□ -0.18
CSMD3Q7Z407 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSMD3Q7Z407 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 RNF152P1-201ENST00000397754 604 ntBASIC13.92□□□□□ -0.18
CSMD3Q7Z407 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CSMD3Q7Z407 FAM207BP-201ENST00000447172 505 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms