Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.97■□□□□ 0.47
SHFQ7M4L6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 CDV3P1-201ENST00000471403 739 ntBASIC17.97■□□□□ 0.47
SHFQ7M4L6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.97■□□□□ 0.47
SHFQ7M4L6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHFQ7M4L6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHFQ7M4L6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHFQ7M4L6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHFQ7M4L6 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.96■□□□□ 0.47
SHFQ7M4L6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHFQ7M4L6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHFQ7M4L6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHFQ7M4L6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHFQ7M4L6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHFQ7M4L6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.96■□□□□ 0.47
SHFQ7M4L6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHFQ7M4L6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHFQ7M4L6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHFQ7M4L6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHFQ7M4L6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
SHFQ7M4L6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHFQ7M4L6 AC019069.1-201ENST00000610008 1333 ntBASIC17.95■□□□□ 0.46
SHFQ7M4L6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.95■□□□□ 0.46
SHFQ7M4L6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHFQ7M4L6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SHFQ7M4L6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms