Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP1BQ7LBR1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 AL356652.1-201ENST00000615962 565 ntBASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP1BQ7LBR1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 BCL2-203ENST00000589955 5011 ntBASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 MYC-209ENST00000641252 345 ntBASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHMP1BQ7LBR1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 AC083880.1-201ENST00000608266 535 ntBASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP1BQ7LBR1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms