Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP50Q70EL3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.69■■□□□ 1.38
USP50Q70EL3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP50Q70EL3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.69■■□□□ 1.38
USP50Q70EL3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP50Q70EL3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
USP50Q70EL3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP50Q70EL3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
USP50Q70EL3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP50Q70EL3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.68■■□□□ 1.38
USP50Q70EL3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.68■■□□□ 1.38
USP50Q70EL3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
USP50Q70EL3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.68■■□□□ 1.38
USP50Q70EL3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
USP50Q70EL3 HOMER2P1-201ENST00000455653 964 ntBASIC23.68■■□□□ 1.38
USP50Q70EL3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.68■■□□□ 1.38
USP50Q70EL3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.68■■□□□ 1.38
USP50Q70EL3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.68■■□□□ 1.38
USP50Q70EL3 AL031432.5-201ENST00000641059 760 ntBASIC23.68■■□□□ 1.38
USP50Q70EL3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP50Q70EL3 AC096733.2-201ENST00000609937 1394 ntBASIC23.67■■□□□ 1.38
USP50Q70EL3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.67■■□□□ 1.38
USP50Q70EL3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.67■■□□□ 1.38
USP50Q70EL3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.67■■□□□ 1.38
USP50Q70EL3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
USP50Q70EL3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC23.67■■□□□ 1.38
USP50Q70EL3 AC007663.1-201ENST00000438948 1240 ntBASIC23.67■■□□□ 1.38
USP50Q70EL3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 MFAP1P1-201ENST00000442257 1255 ntBASIC23.67■■□□□ 1.38
USP50Q70EL3 HCG4P8-203ENST00000443049 980 ntBASIC23.67■■□□□ 1.38
USP50Q70EL3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.67■■□□□ 1.38
USP50Q70EL3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23.67■■□□□ 1.38
USP50Q70EL3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.67■■□□□ 1.38
USP50Q70EL3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
USP50Q70EL3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.67■■□□□ 1.38
USP50Q70EL3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.67■■□□□ 1.38
USP50Q70EL3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
USP50Q70EL3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
USP50Q70EL3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.67■■□□□ 1.38
USP50Q70EL3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP50Q70EL3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP50Q70EL3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.66■■□□□ 1.38
USP50Q70EL3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP50Q70EL3 RCC2P6-201ENST00000526625 1557 ntBASIC23.66■■□□□ 1.38
USP50Q70EL3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.66■■□□□ 1.38
USP50Q70EL3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.66■■□□□ 1.38
USP50Q70EL3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP50Q70EL3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.66■■□□□ 1.38
USP50Q70EL3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP50Q70EL3 YBX1P10-201ENST00000444752 975 ntBASIC23.66■■□□□ 1.38
USP50Q70EL3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
USP50Q70EL3 KRT18P16-201ENST00000510337 1294 ntBASIC23.66■■□□□ 1.38
USP50Q70EL3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.66■■□□□ 1.38
USP50Q70EL3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.66■■□□□ 1.38
USP50Q70EL3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
USP50Q70EL3 AC011298.2-201ENST00000617989 482 ntBASIC23.66■■□□□ 1.38
USP50Q70EL3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.66■■□□□ 1.38
USP50Q70EL3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.66■■□□□ 1.38
USP50Q70EL3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
USP50Q70EL3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP50Q70EL3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP50Q70EL3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP50Q70EL3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP50Q70EL3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
USP50Q70EL3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
USP50Q70EL3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.65■■□□□ 1.38
USP50Q70EL3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP50Q70EL3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP50Q70EL3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP50Q70EL3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.65■■□□□ 1.38
USP50Q70EL3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.65■■□□□ 1.38
USP50Q70EL3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.65■■□□□ 1.38
USP50Q70EL3 CLEC4GP1-201ENST00000596555 870 ntBASIC23.65■■□□□ 1.38
USP50Q70EL3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.65■■□□□ 1.38
USP50Q70EL3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP50Q70EL3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP50Q70EL3 KRT8P17-201ENST00000453110 1448 ntBASIC23.65■■□□□ 1.38
USP50Q70EL3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP50Q70EL3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.65■■□□□ 1.38
USP50Q70EL3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.64■■□□□ 1.38
USP50Q70EL3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
USP50Q70EL3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
USP50Q70EL3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms