Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 AFG3L1P-217ENST00000557444 2447 ntBASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 AP001271.2-201ENST00000624018 1556 ntBASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 PHGDH-210ENST00000641115 1638 ntBASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 AC125437.2-201ENST00000625180 2167 ntBASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.18■□□□□ 0.34
COLCA1Q6ZS62 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 AL390719.1-204ENST00000412397 1219 ntBASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 HLA-L-209ENST00000420110 1011 ntBASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 AC060766.5-201ENST00000590539 871 ntBASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
COLCA1Q6ZS62 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 ID1-201ENST00000376105 1233 ntBASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COLCA1Q6ZS62 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.15■□□□□ 0.34
COLCA1Q6ZS62 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms