Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS1Q6VY07 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.12■□□□□ 0.81
PACS1Q6VY07 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS1Q6VY07 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.12■□□□□ 0.81
PACS1Q6VY07 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.12■□□□□ 0.81
PACS1Q6VY07 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PACS1Q6VY07 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.12■□□□□ 0.81
PACS1Q6VY07 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.12■□□□□ 0.81
PACS1Q6VY07 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PACS1Q6VY07 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS1Q6VY07 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PACS1Q6VY07 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PACS1Q6VY07 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS1Q6VY07 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS1Q6VY07 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.12■□□□□ 0.81
PACS1Q6VY07 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 KRT18P68-201ENST00000392293 1000 ntBASIC20.11■□□□□ 0.81
PACS1Q6VY07 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 AC105036.2-201ENST00000569468 176 ntBASIC20.11■□□□□ 0.81
PACS1Q6VY07 AL121832.2-201ENST00000610979 668 ntBASIC20.11■□□□□ 0.81
PACS1Q6VY07 AC105020.6-201ENST00000621523 1217 ntBASIC20.11■□□□□ 0.81
PACS1Q6VY07 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PACS1Q6VY07 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PACS1Q6VY07 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 NCF1B-203ENST00000435988 1254 ntBASIC20.1■□□□□ 0.81
PACS1Q6VY07 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
PACS1Q6VY07 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PACS1Q6VY07 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 MKRN4P-201ENST00000444706 1521 ntBASIC20.09■□□□□ 0.81
PACS1Q6VY07 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PACS1Q6VY07 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PACS1Q6VY07 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PACS1Q6VY07 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PACS1Q6VY07 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PACS1Q6VY07 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms