Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
MRPL54Q6P161 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.05■□□□□ -0
MRPL54Q6P161 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MRPL54Q6P161 KRT8P33-201ENST00000508125 1423 ntBASIC15.05■□□□□ -0
MRPL54Q6P161 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
MRPL54Q6P161 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.05■□□□□ -0
MRPL54Q6P161 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.05■□□□□ -0
MRPL54Q6P161 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.05■□□□□ -0
MRPL54Q6P161 AL138781.2-201ENST00000617896 1843 ntBASIC15.05■□□□□ -0
MRPL54Q6P161 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL54Q6P161 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.05■□□□□ -0
MRPL54Q6P161 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL54Q6P161 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL54Q6P161 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL54Q6P161 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.05■□□□□ -0
MRPL54Q6P161 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MRPL54Q6P161 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
MRPL54Q6P161 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
MRPL54Q6P161 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.04■□□□□ -0
MRPL54Q6P161 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 YBX1P4-201ENST00000392794 808 ntBASIC15.04■□□□□ -0
MRPL54Q6P161 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.04■□□□□ -0
MRPL54Q6P161 AC103834.1-201ENST00000520383 144 ntBASIC15.04■□□□□ -0
MRPL54Q6P161 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.04■□□□□ -0
MRPL54Q6P161 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
MRPL54Q6P161 AC092028.1-203ENST00000608262 953 ntBASIC15.04■□□□□ -0
MRPL54Q6P161 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MRPL54Q6P161 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.04■□□□□ -0
MRPL54Q6P161 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.04■□□□□ -0
MRPL54Q6P161 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.04■□□□□ -0
MRPL54Q6P161 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
MRPL54Q6P161 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MRPL54Q6P161 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.03■□□□□ -0
MRPL54Q6P161 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.03■□□□□ -0
MRPL54Q6P161 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.03■□□□□ -0
MRPL54Q6P161 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.03■□□□□ -0
MRPL54Q6P161 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.03■□□□□ -0
MRPL54Q6P161 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.03■□□□□ -0
MRPL54Q6P161 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MRPL54Q6P161 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.03■□□□□ -0
MRPL54Q6P161 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
MRPL54Q6P161 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.03■□□□□ -0
MRPL54Q6P161 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL54Q6P161 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL54Q6P161 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.02■□□□□ -0
MRPL54Q6P161 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.02■□□□□ -0
MRPL54Q6P161 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.02■□□□□ -0
MRPL54Q6P161 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL54Q6P161 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL54Q6P161 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.02■□□□□ -0
MRPL54Q6P161 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.02■□□□□ -0
MRPL54Q6P161 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL54Q6P161 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.02■□□□□ -0
MRPL54Q6P161 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.02■□□□□ -0
MRPL54Q6P161 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL54Q6P161 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPL54Q6P161 AL031848.2-201ENST00000607670 837 ntBASIC15.02■□□□□ -0
MRPL54Q6P161 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.02■□□□□ -0
MRPL54Q6P161 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.02■□□□□ -0
MRPL54Q6P161 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.02■□□□□ -0
MRPL54Q6P161 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.02■□□□□ -0
MRPL54Q6P161 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL54Q6P161 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL54Q6P161 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL54Q6P161 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL54Q6P161 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MRPL54Q6P161 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
MRPL54Q6P161 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.02□□□□□ -0.01
MRPL54Q6P161 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL54Q6P161 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
MRPL54Q6P161 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
MRPL54Q6P161 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.02□□□□□ -0.01
MRPL54Q6P161 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL54Q6P161 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms