Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 AC092368.3-202ENST00000574180 1591 ntBASIC20.77■□□□□ 0.92
RAB6CQ53S08 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB6CQ53S08 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB6CQ53S08 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB6CQ53S08 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB6CQ53S08 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 PNMA6B-201ENST00000538162 1200 ntBASIC20.77■□□□□ 0.92
RAB6CQ53S08 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB6CQ53S08 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB6CQ53S08 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB6CQ53S08 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB6CQ53S08 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.77■□□□□ 0.91
RAB6CQ53S08 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RAB6CQ53S08 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB6CQ53S08 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB6CQ53S08 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6CQ53S08 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6CQ53S08 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6CQ53S08 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB6CQ53S08 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6CQ53S08 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB6CQ53S08 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.76■□□□□ 0.91
RAB6CQ53S08 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB6CQ53S08 HLA-B-256ENST00000639848 1089 ntBASIC20.76■□□□□ 0.91
RAB6CQ53S08 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB6CQ53S08 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6CQ53S08 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6CQ53S08 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB6CQ53S08 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB6CQ53S08 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6CQ53S08 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6CQ53S08 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6CQ53S08 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.75■□□□□ 0.91
RAB6CQ53S08 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.75■□□□□ 0.91
RAB6CQ53S08 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RAB6CQ53S08 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB6CQ53S08 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB6CQ53S08 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6CQ53S08 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6CQ53S08 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RAB6CQ53S08 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6CQ53S08 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6CQ53S08 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB6CQ53S08 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6CQ53S08 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6CQ53S08 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6CQ53S08 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6CQ53S08 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB6CQ53S08 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6CQ53S08 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB6CQ53S08 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RAB6CQ53S08 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RAB6CQ53S08 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB6CQ53S08 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.74■□□□□ 0.91
RAB6CQ53S08 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB6CQ53S08 AC060766.5-201ENST00000590539 871 ntBASIC20.74■□□□□ 0.91
RAB6CQ53S08 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6CQ53S08 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.74■□□□□ 0.91
RAB6CQ53S08 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB6CQ53S08 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6CQ53S08 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6CQ53S08 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB6CQ53S08 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB6CQ53S08 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB6CQ53S08 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RAB6CQ53S08 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB6CQ53S08 HLA-G-202ENST00000376815 851 ntBASIC20.73■□□□□ 0.91
RAB6CQ53S08 HLA-G-203ENST00000376818 1127 ntBASIC20.73■□□□□ 0.91
RAB6CQ53S08 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB6CQ53S08 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.73■□□□□ 0.91
RAB6CQ53S08 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB6CQ53S08 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.73■□□□□ 0.91
RAB6CQ53S08 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RAB6CQ53S08 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB6CQ53S08 AL158211.5-201ENST00000623583 2518 ntBASIC20.73■□□□□ 0.91
RAB6CQ53S08 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB6CQ53S08 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB6CQ53S08 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB6CQ53S08 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB6CQ53S08 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB6CQ53S08 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB6CQ53S08 RNA5SP413-201ENST00000516373 109 ntBASIC20.72■□□□□ 0.91
RAB6CQ53S08 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB6CQ53S08 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms