Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 AL390719.1-204ENST00000412397 1219 ntBASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 UNC93B5-201ENST00000530315 699 ntBASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 MIR4651-201ENST00000582622 73 ntBASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.39■□□□□ 0.69
CCSMST1Q4G0I0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 AC008403.3-201ENST00000598924 454 ntBASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.38■□□□□ 0.69
CCSMST1Q4G0I0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 KRT16P6-202ENST00000425692 1426 ntBASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCSMST1Q4G0I0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 CD99P1-205ENST00000527459 561 ntBASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.36■□□□□ 0.69
CCSMST1Q4G0I0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCSMST1Q4G0I0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms