Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC35.4■■■■□ 3.26
HMGXB3Q12766 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC35.4■■■■□ 3.26
HMGXB3Q12766 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
HMGXB3Q12766 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC35.4■■■■□ 3.26
HMGXB3Q12766 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
HMGXB3Q12766 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
HMGXB3Q12766 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC35.4■■■■□ 3.26
HMGXB3Q12766 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC35.39■■■■□ 3.26
HMGXB3Q12766 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
HMGXB3Q12766 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
HMGXB3Q12766 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC35.39■■■■□ 3.26
HMGXB3Q12766 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
HMGXB3Q12766 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
HMGXB3Q12766 PTPA-216ENST00000432651 857 ntTSL 2 BASIC35.39■■■■□ 3.26
HMGXB3Q12766 PP7080-204ENST00000510714 601 ntTSL 3 BASIC35.39■■■■□ 3.26
HMGXB3Q12766 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
HMGXB3Q12766 AC131212.4-201ENST00000623606 975 ntBASIC35.39■■■■□ 3.26
HMGXB3Q12766 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
HMGXB3Q12766 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC35.39■■■■□ 3.26
HMGXB3Q12766 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
HMGXB3Q12766 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC35.38■■■■□ 3.26
HMGXB3Q12766 HOMER2P1-201ENST00000455653 964 ntBASIC35.38■■■■□ 3.25
HMGXB3Q12766 ME2-206ENST00000638410 2289 ntTSL 5 BASIC35.38■■■■□ 3.25
HMGXB3Q12766 ME2-210ENST00000639255 2262 ntTSL 5 BASIC35.38■■■■□ 3.25
HMGXB3Q12766 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC35.38■■■■□ 3.25
HMGXB3Q12766 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
HMGXB3Q12766 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC35.38■■■■□ 3.25
HMGXB3Q12766 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC35.38■■■■□ 3.25
HMGXB3Q12766 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC35.38■■■■□ 3.25
HMGXB3Q12766 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC35.38■■■■□ 3.25
HMGXB3Q12766 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC35.38■■■■□ 3.25
HMGXB3Q12766 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
HMGXB3Q12766 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC35.37■■■■□ 3.25
HMGXB3Q12766 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC35.37■■■■□ 3.25
HMGXB3Q12766 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 GXYLT1P6-201ENST00000456472 1187 ntBASIC35.37■■■■□ 3.25
HMGXB3Q12766 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC35.37■■■■□ 3.25
HMGXB3Q12766 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC35.37■■■■□ 3.25
HMGXB3Q12766 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
HMGXB3Q12766 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC35.37■■■■□ 3.25
HMGXB3Q12766 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC35.37■■■■□ 3.25
HMGXB3Q12766 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC35.37■■■■□ 3.25
HMGXB3Q12766 AC011298.2-201ENST00000617989 482 ntBASIC35.37■■■■□ 3.25
HMGXB3Q12766 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC35.36■■■■□ 3.25
HMGXB3Q12766 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
HMGXB3Q12766 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC35.36■■■■□ 3.25
HMGXB3Q12766 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC35.36■■■■□ 3.25
HMGXB3Q12766 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
HMGXB3Q12766 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
HMGXB3Q12766 PALM-207ENST00000590161 2137 ntTSL 4 BASIC35.36■■■■□ 3.25
HMGXB3Q12766 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
HMGXB3Q12766 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC35.36■■■■□ 3.25
HMGXB3Q12766 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC35.36■■■■□ 3.25
HMGXB3Q12766 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC35.36■■■■□ 3.25
HMGXB3Q12766 AC116351.2-201ENST00000606540 1585 ntBASIC35.36■■■■□ 3.25
HMGXB3Q12766 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
HMGXB3Q12766 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC35.35■■■■□ 3.25
HMGXB3Q12766 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC35.35■■■■□ 3.25
HMGXB3Q12766 CYGB-204ENST00000589342 815 ntTSL 3 BASIC35.35■■■■□ 3.25
HMGXB3Q12766 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC35.35■■■■□ 3.25
HMGXB3Q12766 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
HMGXB3Q12766 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
HMGXB3Q12766 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
HMGXB3Q12766 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC35.35■■■■□ 3.25
HMGXB3Q12766 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC35.35■■■■□ 3.25
HMGXB3Q12766 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC35.34■■■■□ 3.25
HMGXB3Q12766 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
HMGXB3Q12766 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC35.34■■■■□ 3.25
HMGXB3Q12766 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
HMGXB3Q12766 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
HMGXB3Q12766 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
HMGXB3Q12766 DAP-202ENST00000432074 1048 ntTSL 2 BASIC35.34■■■■□ 3.25
HMGXB3Q12766 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC35.34■■■■□ 3.25
HMGXB3Q12766 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC35.34■■■■□ 3.25
HMGXB3Q12766 AC130371.2-201ENST00000619443 611 ntBASIC35.34■■■■□ 3.25
HMGXB3Q12766 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
HMGXB3Q12766 STK25-204ENST00000405585 1643 ntTSL 2 BASIC35.34■■■■□ 3.25
HMGXB3Q12766 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
HMGXB3Q12766 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
HMGXB3Q12766 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC35.33■■■■□ 3.25
HMGXB3Q12766 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
HMGXB3Q12766 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC35.33■■■■□ 3.25
HMGXB3Q12766 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC35.33■■■■□ 3.25
HMGXB3Q12766 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC35.33■■■■□ 3.25
HMGXB3Q12766 AL023803.3-201ENST00000615559 522 ntBASIC35.33■■■■□ 3.25
HMGXB3Q12766 AC011558.1-201ENST00000623459 338 ntBASIC35.33■■■■□ 3.25
HMGXB3Q12766 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC35.33■■■■□ 3.25
HMGXB3Q12766 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC35.33■■■■□ 3.25
HMGXB3Q12766 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC35.33■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms