Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.2■□□□□ 0.5
CDC42P60953 AL358852.1-201ENST00000623174 1268 ntBASIC18.2■□□□□ 0.5
CDC42P60953 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CDC42P60953 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.2■□□□□ 0.5
CDC42P60953 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC42P60953 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC42P60953 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.2■□□□□ 0.5
CDC42P60953 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.2■□□□□ 0.5
CDC42P60953 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.2■□□□□ 0.5
CDC42P60953 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.19■□□□□ 0.5
CDC42P60953 AC010141.2-201ENST00000452426 721 ntBASIC18.19■□□□□ 0.5
CDC42P60953 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.19■□□□□ 0.5
CDC42P60953 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.19■□□□□ 0.5
CDC42P60953 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDC42P60953 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDC42P60953 AL354811.1-201ENST00000610286 706 ntBASIC18.19■□□□□ 0.5
CDC42P60953 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.19■□□□□ 0.5
CDC42P60953 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.19■□□□□ 0.5
CDC42P60953 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDC42P60953 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.19■□□□□ 0.5
CDC42P60953 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDC42P60953 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42P60953 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.18■□□□□ 0.5
CDC42P60953 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.18■□□□□ 0.5
CDC42P60953 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDC42P60953 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.18■□□□□ 0.5
CDC42P60953 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDC42P60953 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDC42P60953 AC007322.3-201ENST00000426526 701 ntBASIC18.18■□□□□ 0.5
CDC42P60953 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CDC42P60953 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.18■□□□□ 0.5
CDC42P60953 AL355001.2-201ENST00000620617 1191 ntBASIC18.18■□□□□ 0.5
CDC42P60953 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.18■□□□□ 0.5
CDC42P60953 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CDC42P60953 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.18■□□□□ 0.5
CDC42P60953 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.18■□□□□ 0.5
CDC42P60953 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDC42P60953 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42P60953 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.18■□□□□ 0.5
CDC42P60953 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
CDC42P60953 RASA4CP-201ENST00000424092 1398 ntBASIC18.17■□□□□ 0.5
CDC42P60953 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDC42P60953 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CDC42P60953 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.17■□□□□ 0.5
CDC42P60953 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CDC42P60953 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.17■□□□□ 0.5
CDC42P60953 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.17■□□□□ 0.5
CDC42P60953 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.17■□□□□ 0.5
CDC42P60953 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.17■□□□□ 0.5
CDC42P60953 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CDC42P60953 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.17■□□□□ 0.5
CDC42P60953 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.17■□□□□ 0.5
CDC42P60953 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.17■□□□□ 0.5
CDC42P60953 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.17■□□□□ 0.5
CDC42P60953 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.17■□□□□ 0.5
CDC42P60953 AC093503.3-201ENST00000624917 2352 ntBASIC18.17■□□□□ 0.5
CDC42P60953 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.17■□□□□ 0.5
CDC42P60953 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42P60953 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.16■□□□□ 0.5
CDC42P60953 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC42P60953 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms