Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.9■□□□□ 0.94
HADHBP55084 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.9■□□□□ 0.94
HADHBP55084 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.9■□□□□ 0.94
HADHBP55084 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.9■□□□□ 0.94
HADHBP55084 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.9■□□□□ 0.94
HADHBP55084 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.9■□□□□ 0.94
HADHBP55084 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HADHBP55084 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HADHBP55084 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HADHBP55084 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.89■□□□□ 0.94
HADHBP55084 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
HADHBP55084 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.89■□□□□ 0.93
HADHBP55084 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HADHBP55084 AL512625.2-201ENST00000417533 625 ntBASIC20.89■□□□□ 0.93
HADHBP55084 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.89■□□□□ 0.93
HADHBP55084 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.89■□□□□ 0.93
HADHBP55084 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.89■□□□□ 0.93
HADHBP55084 C2orf69P4-201ENST00000565394 541 ntBASIC20.89■□□□□ 0.93
HADHBP55084 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.89■□□□□ 0.93
HADHBP55084 AL589743.5-201ENST00000616611 1050 ntBASIC20.89■□□□□ 0.93
HADHBP55084 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.89■□□□□ 0.93
HADHBP55084 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
HADHBP55084 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HADHBP55084 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.89■□□□□ 0.93
HADHBP55084 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HADHBP55084 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HADHBP55084 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HADHBP55084 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.88■□□□□ 0.93
HADHBP55084 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHBP55084 AC098818.2-201ENST00000564925 2320 ntBASIC20.88■□□□□ 0.93
HADHBP55084 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHBP55084 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HADHBP55084 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HADHBP55084 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.88■□□□□ 0.93
HADHBP55084 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHBP55084 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.88■□□□□ 0.93
HADHBP55084 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HADHBP55084 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.88■□□□□ 0.93
HADHBP55084 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.88■□□□□ 0.93
HADHBP55084 BID-214ENST00000617586 542 ntTSL 5 BASIC20.88■□□□□ 0.93
HADHBP55084 AC008694.1-202ENST00000636953 945 ntBASIC20.88■□□□□ 0.93
HADHBP55084 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHBP55084 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHBP55084 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HADHBP55084 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.88■□□□□ 0.93
HADHBP55084 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HADHBP55084 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HADHBP55084 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.87■□□□□ 0.93
HADHBP55084 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HADHBP55084 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.87■□□□□ 0.93
HADHBP55084 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HADHBP55084 AC007322.1-201ENST00000426983 750 ntBASIC20.87■□□□□ 0.93
HADHBP55084 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.87■□□□□ 0.93
HADHBP55084 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.87■□□□□ 0.93
HADHBP55084 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HADHBP55084 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.87■□□□□ 0.93
HADHBP55084 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HADHBP55084 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HADHBP55084 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
HADHBP55084 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HADHBP55084 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HADHBP55084 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.86■□□□□ 0.93
HADHBP55084 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.86■□□□□ 0.93
HADHBP55084 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.86■□□□□ 0.93
HADHBP55084 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.86■□□□□ 0.93
HADHBP55084 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HADHBP55084 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HADHBP55084 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HADHBP55084 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms