Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TUBP50607 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TUBP50607 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TUBP50607 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TUBP50607 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TUBP50607 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TUBP50607 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TUBP50607 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.98■□□□□ 0.95
TUBP50607 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TUBP50607 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
TUBP50607 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TUBP50607 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TUBP50607 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TUBP50607 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TUBP50607 PTBP1P-201ENST00000554374 1601 ntBASIC20.97■□□□□ 0.95
TUBP50607 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TUBP50607 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TUBP50607 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TUBP50607 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TUBP50607 UBE2SP1-201ENST00000450587 669 ntBASIC20.97■□□□□ 0.95
TUBP50607 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.97■□□□□ 0.95
TUBP50607 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TUBP50607 RPPH1-201ENST00000516869 333 ntBASIC20.97■□□□□ 0.95
TUBP50607 C1QBPP2-201ENST00000528754 825 ntBASIC20.97■□□□□ 0.95
TUBP50607 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.97■□□□□ 0.95
TUBP50607 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.97■□□□□ 0.95
TUBP50607 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.97■□□□□ 0.95
TUBP50607 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.97■□□□□ 0.95
TUBP50607 MTDHP1-201ENST00000605323 784 ntBASIC20.97■□□□□ 0.95
TUBP50607 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.97■□□□□ 0.95
TUBP50607 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TUBP50607 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.97■□□□□ 0.95
TUBP50607 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TUBP50607 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.97■□□□□ 0.95
TUBP50607 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.97■□□□□ 0.95
TUBP50607 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.96■□□□□ 0.95
TUBP50607 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TUBP50607 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.96■□□□□ 0.95
TUBP50607 AC093827.2-201ENST00000512654 315 ntBASIC20.96■□□□□ 0.95
TUBP50607 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.96■□□□□ 0.95
TUBP50607 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.96■□□□□ 0.95
TUBP50607 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.96■□□□□ 0.95
TUBP50607 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.96■□□□□ 0.95
TUBP50607 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TUBP50607 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
TUBP50607 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.95■□□□□ 0.94
TUBP50607 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TUBP50607 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.95■□□□□ 0.94
TUBP50607 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.95■□□□□ 0.94
TUBP50607 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.95■□□□□ 0.94
TUBP50607 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.95■□□□□ 0.94
TUBP50607 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.95■□□□□ 0.94
TUBP50607 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.95■□□□□ 0.94
TUBP50607 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TUBP50607 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TUBP50607 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TUBP50607 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TUBP50607 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TUBP50607 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.94■□□□□ 0.94
TUBP50607 HLA-G-202ENST00000376815 851 ntBASIC20.94■□□□□ 0.94
TUBP50607 HLA-G-203ENST00000376818 1127 ntBASIC20.94■□□□□ 0.94
TUBP50607 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.94■□□□□ 0.94
TUBP50607 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.94■□□□□ 0.94
TUBP50607 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.94■□□□□ 0.94
TUBP50607 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
TUBP50607 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TUBP50607 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBP50607 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms