Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC9A3P48764 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC9A3P48764 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC9A3P48764 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC9A3P48764 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC9A3P48764 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SLC9A3P48764 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC9A3P48764 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC9A3P48764 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC9A3P48764 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC9A3P48764 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
SLC9A3P48764 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.23■□□□□ 0.51
SLC9A3P48764 MIR6821-201ENST00000617625 74 ntBASIC18.23■□□□□ 0.51
SLC9A3P48764 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC9A3P48764 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC9A3P48764 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC9A3P48764 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC9A3P48764 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC9A3P48764 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC9A3P48764 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SLC9A3P48764 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC9A3P48764 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC9A3P48764 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SLC9A3P48764 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC9A3P48764 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC9A3P48764 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SLC9A3P48764 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC9A3P48764 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC9A3P48764 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC9A3P48764 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 BX119927.1-201ENST00000636596 1552 ntBASIC18.21■□□□□ 0.51
SLC9A3P48764 CYP21A1P-202ENST00000354927 1481 ntBASIC18.21■□□□□ 0.51
SLC9A3P48764 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
SLC9A3P48764 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC9A3P48764 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC9A3P48764 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SLC9A3P48764 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SLC9A3P48764 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.21■□□□□ 0.51
SLC9A3P48764 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC9A3P48764 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC9A3P48764 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC9A3P48764 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC9A3P48764 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SLC9A3P48764 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
SLC9A3P48764 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC9A3P48764 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC9A3P48764 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SLC9A3P48764 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC9A3P48764 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.2■□□□□ 0.5
SLC9A3P48764 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.2■□□□□ 0.5
SLC9A3P48764 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC9A3P48764 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC9A3P48764 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SLC9A3P48764 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC9A3P48764 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC9A3P48764 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC9A3P48764 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC9A3P48764 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC9A3P48764 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC9A3P48764 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms