Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT9P35527 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
KRT9P35527 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT9P35527 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.78■■□□□ 1.08
KRT9P35527 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.78■■□□□ 1.08
KRT9P35527 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.78■■□□□ 1.08
KRT9P35527 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.78■■□□□ 1.08
KRT9P35527 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT9P35527 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT9P35527 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KRT9P35527 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.77■■□□□ 1.08
KRT9P35527 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.77■■□□□ 1.08
KRT9P35527 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KRT9P35527 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.77■■□□□ 1.08
KRT9P35527 TREX1-205ENST00000625293 1783 ntBASIC21.77■■□□□ 1.08
KRT9P35527 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
KRT9P35527 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT9P35527 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT9P35527 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KRT9P35527 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.77■■□□□ 1.08
KRT9P35527 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.77■■□□□ 1.08
KRT9P35527 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.77■■□□□ 1.08
KRT9P35527 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KRT9P35527 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT9P35527 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT9P35527 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
KRT9P35527 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
KRT9P35527 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT9P35527 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KRT9P35527 AC005332.7-201ENST00000614046 2005 ntBASIC21.77■■□□□ 1.07
KRT9P35527 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
KRT9P35527 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
KRT9P35527 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.76■■□□□ 1.07
KRT9P35527 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT9P35527 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
KRT9P35527 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT9P35527 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT9P35527 AL162412.1-201ENST00000567129 965 ntBASIC21.76■■□□□ 1.07
KRT9P35527 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.76■■□□□ 1.07
KRT9P35527 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
KRT9P35527 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
KRT9P35527 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT9P35527 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.76■■□□□ 1.07
KRT9P35527 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT9P35527 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.75■■□□□ 1.07
KRT9P35527 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.75■■□□□ 1.07
KRT9P35527 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
KRT9P35527 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT9P35527 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT9P35527 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KRT9P35527 AC093484.2-201ENST00000580996 2166 ntBASIC21.75■■□□□ 1.07
KRT9P35527 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT9P35527 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT9P35527 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT9P35527 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT9P35527 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT9P35527 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
KRT9P35527 CNN2P6-201ENST00000439038 900 ntBASIC21.74■■□□□ 1.07
KRT9P35527 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT9P35527 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
KRT9P35527 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
KRT9P35527 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT9P35527 AP000974.1-201ENST00000623909 2387 ntBASIC21.74■■□□□ 1.07
KRT9P35527 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.74■■□□□ 1.07
KRT9P35527 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT9P35527 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT9P35527 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT9P35527 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT9P35527 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT9P35527 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT9P35527 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
KRT9P35527 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT9P35527 AC016405.3-201ENST00000607710 860 ntBASIC21.73■■□□□ 1.07
KRT9P35527 AL356652.1-201ENST00000615962 565 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms