Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VARSP26640 SMG8-203ENST00000578922 2178 ntBASIC19.56■□□□□ 0.72
VARSP26640 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VARSP26640 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.55■□□□□ 0.72
VARSP26640 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.55■□□□□ 0.72
VARSP26640 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.55■□□□□ 0.72
VARSP26640 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.55■□□□□ 0.72
VARSP26640 PGM5P4-201ENST00000421970 445 ntBASIC19.55■□□□□ 0.72
VARSP26640 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.55■□□□□ 0.72
VARSP26640 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VARSP26640 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 AC100791.3-201ENST00000617619 330 ntBASIC19.55■□□□□ 0.72
VARSP26640 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.55■□□□□ 0.72
VARSP26640 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VARSP26640 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VARSP26640 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
VARSP26640 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.54■□□□□ 0.72
VARSP26640 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.54■□□□□ 0.72
VARSP26640 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.54■□□□□ 0.72
VARSP26640 AC010980.2-201ENST00000587099 1412 ntBASIC19.54■□□□□ 0.72
VARSP26640 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
VARSP26640 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.54■□□□□ 0.72
VARSP26640 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.54■□□□□ 0.72
VARSP26640 AC105036.2-201ENST00000569468 176 ntBASIC19.54■□□□□ 0.72
VARSP26640 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VARSP26640 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.54■□□□□ 0.72
VARSP26640 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.54■□□□□ 0.72
VARSP26640 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VARSP26640 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VARSP26640 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.53■□□□□ 0.72
VARSP26640 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.53■□□□□ 0.72
VARSP26640 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.53■□□□□ 0.72
VARSP26640 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.53■□□□□ 0.72
VARSP26640 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.53■□□□□ 0.72
VARSP26640 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VARSP26640 CYP2T3P-201ENST00000601990 817 ntBASIC19.53■□□□□ 0.72
VARSP26640 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.53■□□□□ 0.72
VARSP26640 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.53■□□□□ 0.72
VARSP26640 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VARSP26640 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.53■□□□□ 0.72
VARSP26640 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VARSP26640 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
VARSP26640 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
VARSP26640 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
VARSP26640 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VARSP26640 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.52■□□□□ 0.72
VARSP26640 KRT18P68-201ENST00000392293 1000 ntBASIC19.52■□□□□ 0.72
VARSP26640 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
VARSP26640 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.52■□□□□ 0.72
VARSP26640 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VARSP26640 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.52■□□□□ 0.72
VARSP26640 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
VARSP26640 DPP3P2-201ENST00000416030 1696 ntBASIC19.52■□□□□ 0.71
VARSP26640 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.52■□□□□ 0.71
VARSP26640 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
VARSP26640 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms