Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX1P22670 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX1P22670 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.69■■□□□ 1.06
RFX1P22670 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX1P22670 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.69■■□□□ 1.06
RFX1P22670 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.69■■□□□ 1.06
RFX1P22670 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.69■■□□□ 1.06
RFX1P22670 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX1P22670 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.69■■□□□ 1.06
RFX1P22670 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.69■■□□□ 1.06
RFX1P22670 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX1P22670 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.69■■□□□ 1.06
RFX1P22670 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFX1P22670 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RFX1P22670 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.68■■□□□ 1.06
RFX1P22670 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RFX1P22670 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 AL391422.3-201ENST00000603791 2761 ntBASIC21.68■■□□□ 1.06
RFX1P22670 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RFX1P22670 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.68■■□□□ 1.06
RFX1P22670 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.68■■□□□ 1.06
RFX1P22670 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.68■■□□□ 1.06
RFX1P22670 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.68■■□□□ 1.06
RFX1P22670 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
RFX1P22670 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.68■■□□□ 1.06
RFX1P22670 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.68■■□□□ 1.06
RFX1P22670 AC010980.2-201ENST00000587099 1412 ntBASIC21.68■■□□□ 1.06
RFX1P22670 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.68■■□□□ 1.06
RFX1P22670 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFX1P22670 AC112907.3-201ENST00000577781 2400 ntBASIC21.67■■□□□ 1.06
RFX1P22670 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFX1P22670 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.67■■□□□ 1.06
RFX1P22670 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFX1P22670 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RFX1P22670 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.67■■□□□ 1.06
RFX1P22670 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX1P22670 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
RFX1P22670 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFX1P22670 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.67■■□□□ 1.06
RFX1P22670 UNC93B5-201ENST00000530315 699 ntBASIC21.67■■□□□ 1.06
RFX1P22670 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.67■■□□□ 1.06
RFX1P22670 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.67■■□□□ 1.06
RFX1P22670 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.67■■□□□ 1.06
RFX1P22670 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
RFX1P22670 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RFX1P22670 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX1P22670 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFX1P22670 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RFX1P22670 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX1P22670 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFX1P22670 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX1P22670 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX1P22670 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFX1P22670 KRT18P68-201ENST00000392293 1000 ntBASIC21.66■■□□□ 1.06
RFX1P22670 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX1P22670 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX1P22670 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.66■■□□□ 1.06
RFX1P22670 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX1P22670 CYP2T3P-201ENST00000601990 817 ntBASIC21.66■■□□□ 1.06
RFX1P22670 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.66■■□□□ 1.06
RFX1P22670 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX1P22670 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX1P22670 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX1P22670 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX1P22670 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.66■■□□□ 1.06
RFX1P22670 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX1P22670 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RFX1P22670 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX1P22670 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX1P22670 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX1P22670 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX1P22670 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX1P22670 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.65■■□□□ 1.06
RFX1P22670 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RFX1P22670 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX1P22670 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX1P22670 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX1P22670 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX1P22670 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms