Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.61■□□□□ 0.41
MSR1P21757 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.61■□□□□ 0.41
MSR1P21757 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.61■□□□□ 0.41
MSR1P21757 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.61■□□□□ 0.41
MSR1P21757 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MSR1P21757 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MSR1P21757 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
MSR1P21757 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.61■□□□□ 0.41
MSR1P21757 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSR1P21757 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.6■□□□□ 0.41
MSR1P21757 SLC29A4P1-201ENST00000398760 971 ntBASIC17.6■□□□□ 0.41
MSR1P21757 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.6■□□□□ 0.41
MSR1P21757 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.6■□□□□ 0.41
MSR1P21757 AC023632.3-201ENST00000521633 145 ntBASIC17.6■□□□□ 0.41
MSR1P21757 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.6■□□□□ 0.41
MSR1P21757 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MSR1P21757 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.6■□□□□ 0.41
MSR1P21757 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
MSR1P21757 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.6■□□□□ 0.41
MSR1P21757 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSR1P21757 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.59■□□□□ 0.41
MSR1P21757 AL691432.2-201ENST00000607222 2038 ntBASIC17.59■□□□□ 0.41
MSR1P21757 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MSR1P21757 GPX1P1-201ENST00000388829 606 ntBASIC17.59■□□□□ 0.41
MSR1P21757 MIPEPP3-201ENST00000412105 444 ntBASIC17.59■□□□□ 0.41
MSR1P21757 NCF1B-203ENST00000435988 1254 ntBASIC17.59■□□□□ 0.41
MSR1P21757 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MSR1P21757 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.59■□□□□ 0.41
MSR1P21757 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.59■□□□□ 0.41
MSR1P21757 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MSR1P21757 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MSR1P21757 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSR1P21757 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MSR1P21757 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
MSR1P21757 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.58■□□□□ 0.41
MSR1P21757 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSR1P21757 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSR1P21757 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.58■□□□□ 0.4
MSR1P21757 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MSR1P21757 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.58■□□□□ 0.4
MSR1P21757 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.58■□□□□ 0.4
MSR1P21757 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MSR1P21757 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.58■□□□□ 0.4
MSR1P21757 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.58■□□□□ 0.4
MSR1P21757 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
MSR1P21757 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MSR1P21757 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.58■□□□□ 0.4
MSR1P21757 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.57■□□□□ 0.4
MSR1P21757 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
MSR1P21757 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSR1P21757 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.57■□□□□ 0.4
MSR1P21757 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MSR1P21757 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.57■□□□□ 0.4
MSR1P21757 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms