Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
VCLP18206 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VCLP18206 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VCLP18206 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.01■□□□□ 0.79
VCLP18206 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VCLP18206 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20■□□□□ 0.79
VCLP18206 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20■□□□□ 0.79
VCLP18206 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20■□□□□ 0.79
VCLP18206 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
VCLP18206 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20■□□□□ 0.79
VCLP18206 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20■□□□□ 0.79
VCLP18206 KRT18P6-201ENST00000555540 1265 ntBASIC20■□□□□ 0.79
VCLP18206 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20■□□□□ 0.79
VCLP18206 MYC-209ENST00000641252 345 ntBASIC20■□□□□ 0.79
VCLP18206 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20■□□□□ 0.79
VCLP18206 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCLP18206 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VCLP18206 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20■□□□□ 0.79
VCLP18206 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20■□□□□ 0.79
VCLP18206 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VCLP18206 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VCLP18206 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VCLP18206 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.99■□□□□ 0.79
VCLP18206 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.99■□□□□ 0.79
VCLP18206 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.99■□□□□ 0.79
VCLP18206 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.99■□□□□ 0.79
VCLP18206 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.99■□□□□ 0.79
VCLP18206 MIR2861-201ENST00000636310 90 ntBASIC19.99■□□□□ 0.79
VCLP18206 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.99■□□□□ 0.79
VCLP18206 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
VCLP18206 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VCLP18206 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
VCLP18206 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.99■□□□□ 0.79
VCLP18206 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.98■□□□□ 0.79
VCLP18206 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.98■□□□□ 0.79
VCLP18206 CD99P1-205ENST00000527459 561 ntBASIC19.98■□□□□ 0.79
VCLP18206 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.98■□□□□ 0.79
VCLP18206 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.98■□□□□ 0.79
VCLP18206 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.98■□□□□ 0.79
VCLP18206 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
VCLP18206 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCLP18206 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCLP18206 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCLP18206 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCLP18206 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCLP18206 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.97■□□□□ 0.79
VCLP18206 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.97■□□□□ 0.79
VCLP18206 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.97■□□□□ 0.79
VCLP18206 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.97■□□□□ 0.79
VCLP18206 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.97■□□□□ 0.79
VCLP18206 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.97■□□□□ 0.79
VCLP18206 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.97■□□□□ 0.79
VCLP18206 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.97■□□□□ 0.79
VCLP18206 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCLP18206 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCLP18206 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VCLP18206 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VCLP18206 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCLP18206 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.97■□□□□ 0.79
VCLP18206 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCLP18206 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.97■□□□□ 0.79
VCLP18206 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCLP18206 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VCLP18206 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.96■□□□□ 0.79
VCLP18206 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.96■□□□□ 0.79
VCLP18206 C2orf69P4-201ENST00000565394 541 ntBASIC19.96■□□□□ 0.79
VCLP18206 AC083880.1-201ENST00000608266 535 ntBASIC19.96■□□□□ 0.79
VCLP18206 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.96■□□□□ 0.79
VCLP18206 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms