Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL11A2P13942 HLA-G-202ENST00000376815 851 ntBASIC24.58■■□□□ 1.53
COL11A2P13942 HLA-G-203ENST00000376818 1127 ntBASIC24.58■■□□□ 1.53
COL11A2P13942 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.58■■□□□ 1.53
COL11A2P13942 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL11A2P13942 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL11A2P13942 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL11A2P13942 RCC2P6-201ENST00000526625 1557 ntBASIC24.58■■□□□ 1.53
COL11A2P13942 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.58■■□□□ 1.52
COL11A2P13942 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.58■■□□□ 1.52
COL11A2P13942 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
COL11A2P13942 AC128688.1-201ENST00000487626 519 ntBASIC24.58■■□□□ 1.52
COL11A2P13942 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
COL11A2P13942 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL11A2P13942 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
COL11A2P13942 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
COL11A2P13942 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL11A2P13942 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL11A2P13942 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL11A2P13942 AL031133.1-201ENST00000406807 723 ntBASIC24.57■■□□□ 1.52
COL11A2P13942 DUSP5P1-201ENST00000441325 1139 ntBASIC24.57■■□□□ 1.52
COL11A2P13942 YBX1P2-201ENST00000489612 999 ntBASIC24.57■■□□□ 1.52
COL11A2P13942 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.57■■□□□ 1.52
COL11A2P13942 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC24.57■■□□□ 1.52
COL11A2P13942 AL024507.2-201ENST00000606070 2574 ntBASIC24.57■■□□□ 1.52
COL11A2P13942 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL11A2P13942 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 AL121603.2-201ENST00000557373 2117 ntBASIC24.56■■□□□ 1.52
COL11A2P13942 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.56■■□□□ 1.52
COL11A2P13942 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
COL11A2P13942 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.56■■□□□ 1.52
COL11A2P13942 HMGA1P5-201ENST00000412453 271 ntBASIC24.56■■□□□ 1.52
COL11A2P13942 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
COL11A2P13942 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC24.56■■□□□ 1.52
COL11A2P13942 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 GRAMD4P8-201ENST00000605465 1115 ntBASIC24.56■■□□□ 1.52
COL11A2P13942 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.56■■□□□ 1.52
COL11A2P13942 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL11A2P13942 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.55■■□□□ 1.52
COL11A2P13942 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
COL11A2P13942 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL11A2P13942 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.55■■□□□ 1.52
COL11A2P13942 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.55■■□□□ 1.52
COL11A2P13942 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
COL11A2P13942 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
COL11A2P13942 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
COL11A2P13942 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL11A2P13942 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL11A2P13942 AP006587.1-201ENST00000534129 1502 ntBASIC24.55■■□□□ 1.52
COL11A2P13942 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL11A2P13942 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.55■■□□□ 1.52
COL11A2P13942 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL11A2P13942 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL11A2P13942 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
COL11A2P13942 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL11A2P13942 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.55■■□□□ 1.52
COL11A2P13942 KRT18P16-201ENST00000510337 1294 ntBASIC24.55■■□□□ 1.52
COL11A2P13942 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL11A2P13942 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL11A2P13942 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL11A2P13942 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
COL11A2P13942 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.54■■□□□ 1.52
COL11A2P13942 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL11A2P13942 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
COL11A2P13942 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL11A2P13942 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC24.54■■□□□ 1.52
COL11A2P13942 COPS8-203ENST00000409334 794 ntTSL 5 BASIC24.54■■□□□ 1.52
COL11A2P13942 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.54■■□□□ 1.52
COL11A2P13942 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
COL11A2P13942 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.54■■□□□ 1.52
COL11A2P13942 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.54■■□□□ 1.52
COL11A2P13942 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL11A2P13942 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL11A2P13942 AC096733.2-201ENST00000609937 1394 ntBASIC24.54■■□□□ 1.52
COL11A2P13942 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
COL11A2P13942 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL11A2P13942 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
COL11A2P13942 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL11A2P13942 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL11A2P13942 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC24.53■■□□□ 1.52
COL11A2P13942 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
COL11A2P13942 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
COL11A2P13942 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.53■■□□□ 1.52
COL11A2P13942 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL11A2P13942 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL11A2P13942 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
COL11A2P13942 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.52■■□□□ 1.52
COL11A2P13942 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
COL11A2P13942 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.52■■□□□ 1.52
COL11A2P13942 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL11A2P13942 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
COL11A2P13942 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms