Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN1P07384 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.58■□□□□ 0.73
CAPN1P07384 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN1P07384 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.58■□□□□ 0.72
CAPN1P07384 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.58■□□□□ 0.72
CAPN1P07384 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.58■□□□□ 0.72
CAPN1P07384 RNA5SP413-201ENST00000516373 109 ntBASIC19.58■□□□□ 0.72
CAPN1P07384 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.58■□□□□ 0.72
CAPN1P07384 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.58■□□□□ 0.72
CAPN1P07384 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.58■□□□□ 0.72
CAPN1P07384 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CAPN1P07384 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN1P07384 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN1P07384 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.58■□□□□ 0.72
CAPN1P07384 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.58■□□□□ 0.72
CAPN1P07384 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.57■□□□□ 0.72
CAPN1P07384 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN1P07384 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CAPN1P07384 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CAPN1P07384 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN1P07384 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
CAPN1P07384 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CAPN1P07384 DUSP5P2-201ENST00000426873 1033 ntBASIC19.57■□□□□ 0.72
CAPN1P07384 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CAPN1P07384 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN1P07384 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.57■□□□□ 0.72
CAPN1P07384 AC097658.1-201ENST00000475555 843 ntBASIC19.57■□□□□ 0.72
CAPN1P07384 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.57■□□□□ 0.72
CAPN1P07384 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.57■□□□□ 0.72
CAPN1P07384 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CAPN1P07384 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN1P07384 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CAPN1P07384 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN1P07384 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.57■□□□□ 0.72
CAPN1P07384 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN1P07384 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN1P07384 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 AC138932.1-201ENST00000534164 6830 ntBASIC19.56■□□□□ 0.72
CAPN1P07384 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CAPN1P07384 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN1P07384 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN1P07384 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CAPN1P07384 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN1P07384 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CAPN1P07384 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN1P07384 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.55■□□□□ 0.72
CAPN1P07384 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.55■□□□□ 0.72
CAPN1P07384 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CAPN1P07384 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.55■□□□□ 0.72
CAPN1P07384 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.55■□□□□ 0.72
CAPN1P07384 AL355472.2-201ENST00000422958 438 ntBASIC19.55■□□□□ 0.72
CAPN1P07384 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 POU5F1P3-201ENST00000428824 1078 ntBASIC19.55■□□□□ 0.72
CAPN1P07384 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CAPN1P07384 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 FAM201B-201ENST00000458407 597 ntBASIC19.55■□□□□ 0.72
CAPN1P07384 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.55■□□□□ 0.72
CAPN1P07384 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.55■□□□□ 0.72
CAPN1P07384 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.55■□□□□ 0.72
CAPN1P07384 AC100791.3-201ENST00000617619 330 ntBASIC19.55■□□□□ 0.72
CAPN1P07384 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CAPN1P07384 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.55■□□□□ 0.72
CAPN1P07384 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN1P07384 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.55■□□□□ 0.72
CAPN1P07384 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.55■□□□□ 0.72
CAPN1P07384 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms