Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CACNA1FO60840 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.23■■□□□ 1.63
CACNA1FO60840 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.23■■□□□ 1.63
CACNA1FO60840 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CACNA1FO60840 NUDT16P1-203ENST00000513809 620 ntBASIC25.23■■□□□ 1.63
CACNA1FO60840 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.23■■□□□ 1.63
CACNA1FO60840 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.23■■□□□ 1.63
CACNA1FO60840 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CACNA1FO60840 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
CACNA1FO60840 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.23■■□□□ 1.63
CACNA1FO60840 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CACNA1FO60840 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CACNA1FO60840 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC25.22■■□□□ 1.63
CACNA1FO60840 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CACNA1FO60840 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
CACNA1FO60840 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
CACNA1FO60840 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.22■■□□□ 1.63
CACNA1FO60840 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.22■■□□□ 1.63
CACNA1FO60840 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.22■■□□□ 1.63
CACNA1FO60840 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CACNA1FO60840 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC25.22■■□□□ 1.63
CACNA1FO60840 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CACNA1FO60840 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC25.22■■□□□ 1.63
CACNA1FO60840 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CACNA1FO60840 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.22■■□□□ 1.63
CACNA1FO60840 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CACNA1FO60840 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
CACNA1FO60840 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.22■■□□□ 1.63
CACNA1FO60840 PRKY-204ENST00000533551 1019 ntBASIC25.22■■□□□ 1.63
CACNA1FO60840 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.22■■□□□ 1.63
CACNA1FO60840 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CACNA1FO60840 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CACNA1FO60840 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.21■■□□□ 1.63
CACNA1FO60840 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 RARRES2P10-201ENST00000564312 460 ntBASIC25.21■■□□□ 1.63
CACNA1FO60840 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.21■■□□□ 1.63
CACNA1FO60840 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.21■■□□□ 1.63
CACNA1FO60840 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CACNA1FO60840 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.21■■□□□ 1.63
CACNA1FO60840 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
CACNA1FO60840 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
CACNA1FO60840 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
CACNA1FO60840 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CACNA1FO60840 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
CACNA1FO60840 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CACNA1FO60840 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.63
CACNA1FO60840 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
CACNA1FO60840 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.2■■□□□ 1.63
CACNA1FO60840 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.2■■□□□ 1.63
CACNA1FO60840 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.2■■□□□ 1.63
CACNA1FO60840 RN7SL471P-201ENST00000580476 299 ntBASIC25.2■■□□□ 1.63
CACNA1FO60840 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.2■■□□□ 1.63
CACNA1FO60840 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CACNA1FO60840 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.2■■□□□ 1.63
CACNA1FO60840 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CACNA1FO60840 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.2■■□□□ 1.62
CACNA1FO60840 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CACNA1FO60840 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CACNA1FO60840 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
CACNA1FO60840 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.2■■□□□ 1.62
CACNA1FO60840 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
CACNA1FO60840 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CACNA1FO60840 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.2■■□□□ 1.62
CACNA1FO60840 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CACNA1FO60840 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.2■■□□□ 1.62
CACNA1FO60840 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.2■■□□□ 1.62
CACNA1FO60840 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
CACNA1FO60840 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CACNA1FO60840 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.19■■□□□ 1.62
CACNA1FO60840 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.19■■□□□ 1.62
CACNA1FO60840 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.19■■□□□ 1.62
CACNA1FO60840 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CACNA1FO60840 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CACNA1FO60840 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CACNA1FO60840 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.19■■□□□ 1.62
CACNA1FO60840 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CACNA1FO60840 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CACNA1FO60840 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.18■■□□□ 1.62
CACNA1FO60840 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CACNA1FO60840 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.18■■□□□ 1.62
CACNA1FO60840 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.18■■□□□ 1.62
CACNA1FO60840 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.18■■□□□ 1.62
CACNA1FO60840 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CACNA1FO60840 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CACNA1FO60840 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CACNA1FO60840 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.18■■□□□ 1.62
CACNA1FO60840 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CACNA1FO60840 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CACNA1FO60840 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CACNA1FO60840 AL353807.1-201ENST00000427475 662 ntBASIC25.18■■□□□ 1.62
CACNA1FO60840 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms