Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GFRA3O60609 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.5■□□□□ 0.71
GFRA3O60609 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GFRA3O60609 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GFRA3O60609 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GFRA3O60609 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GFRA3O60609 AC004951.3-201ENST00000418645 1148 ntBASIC19.5■□□□□ 0.71
GFRA3O60609 PMS2P1-201ENST00000431037 1228 ntBASIC19.5■□□□□ 0.71
GFRA3O60609 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
GFRA3O60609 AC120114.3-201ENST00000611923 658 ntBASIC19.5■□□□□ 0.71
GFRA3O60609 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
GFRA3O60609 AC087742.1-201ENST00000575880 1738 ntBASIC19.5■□□□□ 0.71
GFRA3O60609 LINC01311-201ENST00000565162 1445 ntBASIC19.5■□□□□ 0.71
GFRA3O60609 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
GFRA3O60609 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GFRA3O60609 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
GFRA3O60609 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFRA3O60609 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
GFRA3O60609 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
GFRA3O60609 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFRA3O60609 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFRA3O60609 TSPY17P-201ENST00000450329 467 ntBASIC19.49■□□□□ 0.71
GFRA3O60609 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.49■□□□□ 0.71
GFRA3O60609 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.49■□□□□ 0.71
GFRA3O60609 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.49■□□□□ 0.71
GFRA3O60609 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.49■□□□□ 0.71
GFRA3O60609 AC011298.2-201ENST00000617989 482 ntBASIC19.49■□□□□ 0.71
GFRA3O60609 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.49■□□□□ 0.71
GFRA3O60609 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.49■□□□□ 0.71
GFRA3O60609 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.49■□□□□ 0.71
GFRA3O60609 AC022898.2-201ENST00000616822 1312 ntBASIC19.49■□□□□ 0.71
GFRA3O60609 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
GFRA3O60609 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFRA3O60609 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.48■□□□□ 0.71
GFRA3O60609 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
GFRA3O60609 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.48■□□□□ 0.71
GFRA3O60609 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
GFRA3O60609 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.48■□□□□ 0.71
GFRA3O60609 AC079781.3-201ENST00000449110 356 ntBASIC19.48■□□□□ 0.71
GFRA3O60609 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.48■□□□□ 0.71
GFRA3O60609 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.48■□□□□ 0.71
GFRA3O60609 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.48■□□□□ 0.71
GFRA3O60609 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.48■□□□□ 0.71
GFRA3O60609 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.48■□□□□ 0.71
GFRA3O60609 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
GFRA3O60609 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA3O60609 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.48■□□□□ 0.71
GFRA3O60609 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 AC096733.2-201ENST00000609937 1394 ntBASIC19.47■□□□□ 0.71
GFRA3O60609 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA3O60609 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA3O60609 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA3O60609 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 AL662844.1-201ENST00000546340 181 ntBASIC19.47■□□□□ 0.71
GFRA3O60609 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.47■□□□□ 0.71
GFRA3O60609 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA3O60609 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA3O60609 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA3O60609 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GFRA3O60609 AC093323.1-202ENST00000635031 2045 ntBASIC19.47■□□□□ 0.71
GFRA3O60609 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA3O60609 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
GFRA3O60609 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA3O60609 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
GFRA3O60609 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.46■□□□□ 0.71
GFRA3O60609 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.46■□□□□ 0.71
GFRA3O60609 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.46■□□□□ 0.71
GFRA3O60609 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA3O60609 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
GFRA3O60609 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.46■□□□□ 0.71
GFRA3O60609 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.46■□□□□ 0.71
GFRA3O60609 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.46■□□□□ 0.71
GFRA3O60609 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms