Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SNAI2O43623 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNAI2O43623 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SNAI2O43623 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.87□□□□□ -0.03
SNAI2O43623 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SNAI2O43623 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.86□□□□□ -0.03
SNAI2O43623 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.86□□□□□ -0.03
SNAI2O43623 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.86□□□□□ -0.03
SNAI2O43623 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.86□□□□□ -0.03
SNAI2O43623 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
SNAI2O43623 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 AL136116.3-201ENST00000402907 1138 ntBASIC14.86□□□□□ -0.03
SNAI2O43623 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.86□□□□□ -0.03
SNAI2O43623 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.86□□□□□ -0.03
SNAI2O43623 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SNAI2O43623 AC027682.1-201ENST00000562846 899 ntBASIC14.86□□□□□ -0.03
SNAI2O43623 AL136162.1-201ENST00000607711 1078 ntBASIC14.86□□□□□ -0.03
SNAI2O43623 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.86□□□□□ -0.03
SNAI2O43623 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.86□□□□□ -0.03
SNAI2O43623 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.86□□□□□ -0.03
SNAI2O43623 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.86□□□□□ -0.03
SNAI2O43623 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SNAI2O43623 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SNAI2O43623 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.85□□□□□ -0.03
SNAI2O43623 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.85□□□□□ -0.03
SNAI2O43623 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
SNAI2O43623 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNAI2O43623 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.85□□□□□ -0.03
SNAI2O43623 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.85□□□□□ -0.03
SNAI2O43623 AC099791.1-201ENST00000416440 715 ntBASIC14.85□□□□□ -0.03
SNAI2O43623 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.85□□□□□ -0.03
SNAI2O43623 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.85□□□□□ -0.03
SNAI2O43623 AC008764.7-201ENST00000593779 1081 ntBASIC14.85□□□□□ -0.03
SNAI2O43623 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.85□□□□□ -0.03
SNAI2O43623 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SNAI2O43623 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SNAI2O43623 AC135279.3-201ENST00000610945 1311 ntBASIC14.85□□□□□ -0.03
SNAI2O43623 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.85□□□□□ -0.03
SNAI2O43623 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SNAI2O43623 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SNAI2O43623 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNAI2O43623 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNAI2O43623 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SNAI2O43623 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 KRT16P2-201ENST00000414673 1423 ntBASIC14.84□□□□□ -0.03
SNAI2O43623 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.84□□□□□ -0.03
SNAI2O43623 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.84□□□□□ -0.03
SNAI2O43623 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SNAI2O43623 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SNAI2O43623 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.84□□□□□ -0.03
SNAI2O43623 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.84□□□□□ -0.03
SNAI2O43623 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.84□□□□□ -0.03
SNAI2O43623 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SNAI2O43623 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.84□□□□□ -0.03
SNAI2O43623 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SNAI2O43623 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.84□□□□□ -0.03
SNAI2O43623 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SNAI2O43623 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SNAI2O43623 TMEM179-206ENST00000616017 1645 ntBASIC14.84□□□□□ -0.03
SNAI2O43623 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNAI2O43623 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNAI2O43623 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNAI2O43623 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNAI2O43623 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SNAI2O43623 AC116050.2-201ENST00000612102 1779 ntBASIC14.83□□□□□ -0.03
SNAI2O43623 AC106820.2-201ENST00000563775 3264 ntBASIC14.83□□□□□ -0.03
SNAI2O43623 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms