Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAFD1O14545 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAFD1O14545 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRAFD1O14545 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
TRAFD1O14545 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAFD1O14545 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAFD1O14545 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.42■□□□□ 0.86
TRAFD1O14545 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.42■□□□□ 0.86
TRAFD1O14545 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAFD1O14545 AC020907.5-201ENST00000624372 1936 ntBASIC20.42■□□□□ 0.86
TRAFD1O14545 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRAFD1O14545 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRAFD1O14545 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRAFD1O14545 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TRAFD1O14545 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAFD1O14545 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAFD1O14545 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRAFD1O14545 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
TRAFD1O14545 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAFD1O14545 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAFD1O14545 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRAFD1O14545 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TRAFD1O14545 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAFD1O14545 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAFD1O14545 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAFD1O14545 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAFD1O14545 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAFD1O14545 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRAFD1O14545 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAFD1O14545 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAFD1O14545 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
TRAFD1O14545 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAFD1O14545 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAFD1O14545 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.4■□□□□ 0.86
TRAFD1O14545 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.4■□□□□ 0.86
TRAFD1O14545 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAFD1O14545 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAFD1O14545 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAFD1O14545 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.4■□□□□ 0.86
TRAFD1O14545 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAFD1O14545 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAFD1O14545 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAFD1O14545 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.39■□□□□ 0.86
TRAFD1O14545 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAFD1O14545 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAFD1O14545 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.39■□□□□ 0.86
TRAFD1O14545 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAFD1O14545 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
TRAFD1O14545 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.39■□□□□ 0.85
TRAFD1O14545 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.39■□□□□ 0.85
TRAFD1O14545 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAFD1O14545 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAFD1O14545 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAFD1O14545 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAFD1O14545 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAFD1O14545 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAFD1O14545 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
TRAFD1O14545 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAFD1O14545 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAFD1O14545 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAFD1O14545 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAFD1O14545 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRAFD1O14545 HLA-B-256ENST00000639848 1089 ntBASIC20.38■□□□□ 0.85
TRAFD1O14545 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAFD1O14545 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAFD1O14545 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAFD1O14545 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAFD1O14545 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRAFD1O14545 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRAFD1O14545 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms