Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.91■□□□□ 0.62
UPK1AO00322 KRT18P68-201ENST00000392293 1000 ntBASIC18.91■□□□□ 0.62
UPK1AO00322 AL512625.2-201ENST00000417533 625 ntBASIC18.91■□□□□ 0.62
UPK1AO00322 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 AC026185.1-201ENST00000445748 174 ntBASIC18.91■□□□□ 0.62
UPK1AO00322 AC093787.1-201ENST00000450396 207 ntBASIC18.91■□□□□ 0.62
UPK1AO00322 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.91■□□□□ 0.62
UPK1AO00322 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.91■□□□□ 0.62
UPK1AO00322 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UPK1AO00322 CYP2T3P-201ENST00000601990 817 ntBASIC18.91■□□□□ 0.62
UPK1AO00322 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.91■□□□□ 0.62
UPK1AO00322 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 DPP3P2-201ENST00000416030 1696 ntBASIC18.91■□□□□ 0.62
UPK1AO00322 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.91■□□□□ 0.62
UPK1AO00322 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
UPK1AO00322 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.91■□□□□ 0.62
UPK1AO00322 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.91■□□□□ 0.62
UPK1AO00322 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1AO00322 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
UPK1AO00322 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 AL355472.2-201ENST00000422958 438 ntBASIC18.9■□□□□ 0.62
UPK1AO00322 AC133552.2-202ENST00000575694 574 ntBASIC18.9■□□□□ 0.62
UPK1AO00322 AL050303.2-201ENST00000619798 666 ntBASIC18.9■□□□□ 0.62
UPK1AO00322 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.9■□□□□ 0.62
UPK1AO00322 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1AO00322 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
UPK1AO00322 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
UPK1AO00322 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
UPK1AO00322 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.89■□□□□ 0.62
UPK1AO00322 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UPK1AO00322 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
UPK1AO00322 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
UPK1AO00322 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.89■□□□□ 0.61
UPK1AO00322 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.89■□□□□ 0.61
UPK1AO00322 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.89■□□□□ 0.61
UPK1AO00322 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
UPK1AO00322 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
UPK1AO00322 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.89■□□□□ 0.61
UPK1AO00322 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.89■□□□□ 0.61
UPK1AO00322 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.89■□□□□ 0.61
UPK1AO00322 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1AO00322 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
UPK1AO00322 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.88■□□□□ 0.61
UPK1AO00322 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.88■□□□□ 0.61
UPK1AO00322 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.88■□□□□ 0.61
UPK1AO00322 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.88■□□□□ 0.61
UPK1AO00322 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
UPK1AO00322 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.88■□□□□ 0.61
UPK1AO00322 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.88■□□□□ 0.61
UPK1AO00322 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.88■□□□□ 0.61
UPK1AO00322 CROCCP5-201ENST00000436658 830 ntBASIC18.88■□□□□ 0.61
UPK1AO00322 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
UPK1AO00322 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
UPK1AO00322 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.88■□□□□ 0.61
UPK1AO00322 AC105020.6-201ENST00000621523 1217 ntBASIC18.88■□□□□ 0.61
UPK1AO00322 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.88■□□□□ 0.61
UPK1AO00322 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.88■□□□□ 0.61
UPK1AO00322 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.88■□□□□ 0.61
UPK1AO00322 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms