Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 AP001330.3-201ENST00000520123 633 ntBASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 AL355001.2-201ENST00000620617 1191 ntBASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 AL032819.2-201ENST00000624543 2162 ntBASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SMIM1B2RUZ4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 LINC01465-201ENST00000408887 1940 ntBASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 AL354811.1-201ENST00000610286 706 ntBASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SMIM1B2RUZ4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 AC091799.1-201ENST00000422823 811 ntBASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.46□□□□□ -0.25
SMIM1B2RUZ4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM1B2RUZ4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM1B2RUZ4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM1B2RUZ4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMIM1B2RUZ4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms