Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3FA6NER0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3FA6NER0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TBC1D3FA6NER0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3FA6NER0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.91■□□□□ 0.78
TBC1D3FA6NER0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3FA6NER0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3FA6NER0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TBC1D3FA6NER0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3FA6NER0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 ECEL1P3-201ENST00000427961 737 ntBASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 AF186192.3-201ENST00000583427 947 ntBASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.9■□□□□ 0.78
TBC1D3FA6NER0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 BX088651.1-201ENST00000540551 451 ntBASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
TBC1D3FA6NER0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 AC211429.1-201ENST00000415277 523 ntBASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 AL353807.1-201ENST00000427475 662 ntBASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3FA6NER0 AC092720.2-201ENST00000602388 1665 ntBASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TBC1D3FA6NER0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 AIRN-201ENST00000601203 4374 ntBASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 AL355355.2-201ENST00000442321 338 ntBASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.86■□□□□ 0.77
TBC1D3FA6NER0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms