Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 AC009113.1-201ENST00000570267 2443 ntBASIC17.37■□□□□ 0.37
SHISA3A0PJX4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 AC079140.4-201ENST00000507448 529 ntBASIC17.37■□□□□ 0.37
SHISA3A0PJX4 AC027682.1-201ENST00000562846 899 ntBASIC17.37■□□□□ 0.37
SHISA3A0PJX4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHISA3A0PJX4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 AC120498.10-201ENST00000621827 505 ntBASIC17.36■□□□□ 0.37
SHISA3A0PJX4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.36■□□□□ 0.37
SHISA3A0PJX4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 AC007322.3-201ENST00000426526 701 ntBASIC17.35■□□□□ 0.37
SHISA3A0PJX4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHISA3A0PJX4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHISA3A0PJX4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms