Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV25-1A0A075B6N4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 BCL2-203ENST00000589955 5011 ntBASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV25-1A0A075B6N4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.33□□□□□ -0.11
TRBV25-1A0A075B6N4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV25-1A0A075B6N4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV25-1A0A075B6N4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV25-1A0A075B6N4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV25-1A0A075B6N4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.33□□□□□ -0.11
TRBV25-1A0A075B6N4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV25-1A0A075B6N4 KRT16P2-201ENST00000414673 1423 ntBASIC14.33□□□□□ -0.11
TRBV25-1A0A075B6N4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV25-1A0A075B6N4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 MIR6084-201ENST00000622012 110 ntBASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV25-1A0A075B6N4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 AC005332.7-201ENST00000614046 2005 ntBASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 IRS3P-201ENST00000223076 1006 ntBASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 AC138907.5-202ENST00000569484 235 ntBASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 TCF3P1-201ENST00000423021 1937 ntBASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV25-1A0A075B6N4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms