Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA11Q9Y5H2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.02■■□□□ 1.6
PCDHGA11Q9Y5H2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGA11Q9Y5H2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGA11Q9Y5H2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
PCDHGA11Q9Y5H2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGA11Q9Y5H2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA11Q9Y5H2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA11Q9Y5H2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA11Q9Y5H2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25■■□□□ 1.59
PCDHGA11Q9Y5H2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25■■□□□ 1.59
PCDHGA11Q9Y5H2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25■■□□□ 1.59
PCDHGA11Q9Y5H2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25■■□□□ 1.59
PCDHGA11Q9Y5H2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA11Q9Y5H2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA11Q9Y5H2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA11Q9Y5H2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDHGA11Q9Y5H2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA11Q9Y5H2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHGA11Q9Y5H2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDHGA11Q9Y5H2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGA11Q9Y5H2 MIR3665-201ENST00000578708 105 ntBASIC24.98■■□□□ 1.59
PCDHGA11Q9Y5H2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGA11Q9Y5H2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGA11Q9Y5H2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGA11Q9Y5H2 AC127502.1-201ENST00000399971 1502 ntBASIC24.97■■□□□ 1.59
PCDHGA11Q9Y5H2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHGA11Q9Y5H2 AP006261.1-201ENST00000584783 668 ntBASIC24.97■■□□□ 1.59
PCDHGA11Q9Y5H2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA11Q9Y5H2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
PCDHGA11Q9Y5H2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGA11Q9Y5H2 DUX4L28-201ENST00000623687 678 ntBASIC24.96■■□□□ 1.59
PCDHGA11Q9Y5H2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHGA11Q9Y5H2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
PCDHGA11Q9Y5H2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDHGA11Q9Y5H2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGA11Q9Y5H2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.94■■□□□ 1.58
PCDHGA11Q9Y5H2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.94■■□□□ 1.58
PCDHGA11Q9Y5H2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGA11Q9Y5H2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGA11Q9Y5H2 AP004833.2-201ENST00000532228 1454 ntBASIC24.94■■□□□ 1.58
PCDHGA11Q9Y5H2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGA11Q9Y5H2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGA11Q9Y5H2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGA11Q9Y5H2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDHGA11Q9Y5H2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGA11Q9Y5H2 AC108673.1-201ENST00000510422 1159 ntBASIC24.92■■□□□ 1.58
PCDHGA11Q9Y5H2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGA11Q9Y5H2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGA11Q9Y5H2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGA11Q9Y5H2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA11Q9Y5H2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.91■■□□□ 1.58
PCDHGA11Q9Y5H2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA11Q9Y5H2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGA11Q9Y5H2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
PCDHGA11Q9Y5H2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGA11Q9Y5H2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGA11Q9Y5H2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHGA11Q9Y5H2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
PCDHGA11Q9Y5H2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.89■■□□□ 1.57
PCDHGA11Q9Y5H2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHGA11Q9Y5H2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGA11Q9Y5H2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGA11Q9Y5H2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
PCDHGA11Q9Y5H2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHGA11Q9Y5H2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHGA11Q9Y5H2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
PCDHGA11Q9Y5H2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGA11Q9Y5H2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGA11Q9Y5H2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGA11Q9Y5H2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGA11Q9Y5H2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
PCDHGA11Q9Y5H2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHGA11Q9Y5H2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
PCDHGA11Q9Y5H2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGA11Q9Y5H2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHGA11Q9Y5H2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHGA11Q9Y5H2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHGA11Q9Y5H2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHGA11Q9Y5H2 AC142086.6-201ENST00000621154 1765 ntBASIC24.82■■□□□ 1.56
PCDHGA11Q9Y5H2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGA11Q9Y5H2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGA11Q9Y5H2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHGA11Q9Y5H2 MIR6090-201ENST00000622481 60 ntBASIC24.81■■□□□ 1.56
PCDHGA11Q9Y5H2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGA11Q9Y5H2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHGA11Q9Y5H2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHGA11Q9Y5H2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHGA11Q9Y5H2 DRD5P2-201ENST00000421395 2012 ntBASIC24.79■■□□□ 1.56
PCDHGA11Q9Y5H2 AL162393.1-201ENST00000437852 946 ntBASIC24.79■■□□□ 1.56
PCDHGA11Q9Y5H2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA11Q9Y5H2 AC087741.3-201ENST00000624270 1347 ntBASIC24.79■■□□□ 1.56
PCDHGA11Q9Y5H2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA11Q9Y5H2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGA11Q9Y5H2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHGA11Q9Y5H2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHGA11Q9Y5H2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGA11Q9Y5H2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGA11Q9Y5H2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGA11Q9Y5H2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms