Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGB6Q9Y5F9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDHGB6Q9Y5F9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PCDHGB6Q9Y5F9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGB6Q9Y5F9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB6Q9Y5F9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDHGB6Q9Y5F9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHGB6Q9Y5F9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB6Q9Y5F9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
PCDHGB6Q9Y5F9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHGB6Q9Y5F9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHGB6Q9Y5F9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGB6Q9Y5F9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PCDHGB6Q9Y5F9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHGB6Q9Y5F9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.24■■□□□ 1.47
PCDHGB6Q9Y5F9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGB6Q9Y5F9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
PCDHGB6Q9Y5F9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGB6Q9Y5F9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGB6Q9Y5F9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGB6Q9Y5F9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHGB6Q9Y5F9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGB6Q9Y5F9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGB6Q9Y5F9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHGB6Q9Y5F9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGB6Q9Y5F9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHGB6Q9Y5F9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB6Q9Y5F9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB6Q9Y5F9 LINC01971-201ENST00000617888 1048 ntBASIC24.19■■□□□ 1.46
PCDHGB6Q9Y5F9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB6Q9Y5F9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
PCDHGB6Q9Y5F9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB6Q9Y5F9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB6Q9Y5F9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB6Q9Y5F9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGB6Q9Y5F9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGB6Q9Y5F9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGB6Q9Y5F9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGB6Q9Y5F9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGB6Q9Y5F9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB6Q9Y5F9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB6Q9Y5F9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
PCDHGB6Q9Y5F9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.17■■□□□ 1.46
PCDHGB6Q9Y5F9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB6Q9Y5F9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PCDHGB6Q9Y5F9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGB6Q9Y5F9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.16■■□□□ 1.46
PCDHGB6Q9Y5F9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGB6Q9Y5F9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGB6Q9Y5F9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
PCDHGB6Q9Y5F9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.14■■□□□ 1.45
PCDHGB6Q9Y5F9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGB6Q9Y5F9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGB6Q9Y5F9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGB6Q9Y5F9 MIR639-201ENST00000384974 98 ntBASIC24.13■■□□□ 1.45
PCDHGB6Q9Y5F9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGB6Q9Y5F9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGB6Q9Y5F9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGB6Q9Y5F9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHGB6Q9Y5F9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGB6Q9Y5F9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHGB6Q9Y5F9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGB6Q9Y5F9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PCDHGB6Q9Y5F9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGB6Q9Y5F9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.11■■□□□ 1.45
PCDHGB6Q9Y5F9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 MIR3648-2-201ENST00000581792 180 ntBASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 DUX4L11-201ENST00000611504 1267 ntBASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 DUX4L12-201ENST00000614593 1267 ntBASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 MIR3648-1-201ENST00000615959 180 ntBASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 DUX4L14-201ENST00000621227 1267 ntBASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHGB6Q9Y5F9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHGB6Q9Y5F9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGB6Q9Y5F9 MIR4449-201ENST00000578365 66 ntBASIC24.09■■□□□ 1.45
PCDHGB6Q9Y5F9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGB6Q9Y5F9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGB6Q9Y5F9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGB6Q9Y5F9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGB6Q9Y5F9 AL135925.1-201ENST00000605920 1701 ntBASIC24.08■■□□□ 1.45
PCDHGB6Q9Y5F9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGB6Q9Y5F9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.07■■□□□ 1.44
PCDHGB6Q9Y5F9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGB6Q9Y5F9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
PCDHGB6Q9Y5F9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGB6Q9Y5F9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGB6Q9Y5F9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHGB6Q9Y5F9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHGB6Q9Y5F9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHGB6Q9Y5F9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
PCDHGB6Q9Y5F9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGB6Q9Y5F9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
PCDHGB6Q9Y5F9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGB6Q9Y5F9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
PCDHGB6Q9Y5F9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGB6Q9Y5F9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms