Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
PTPN22Q9Y2R2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.16■■■□□ 2.42
PTPN22Q9Y2R2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PTPN22Q9Y2R2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PTPN22Q9Y2R2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
PTPN22Q9Y2R2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PTPN22Q9Y2R2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PTPN22Q9Y2R2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PTPN22Q9Y2R2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PTPN22Q9Y2R2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PTPN22Q9Y2R2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.13■■■□□ 2.41
PTPN22Q9Y2R2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.12■■■□□ 2.41
PTPN22Q9Y2R2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PTPN22Q9Y2R2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.1■■■□□ 2.41
PTPN22Q9Y2R2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.1■■■□□ 2.41
PTPN22Q9Y2R2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
PTPN22Q9Y2R2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.08■■■□□ 2.41
PTPN22Q9Y2R2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PTPN22Q9Y2R2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.08■■■□□ 2.41
PTPN22Q9Y2R2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PTPN22Q9Y2R2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PTPN22Q9Y2R2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.07■■■□□ 2.4
PTPN22Q9Y2R2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.07■■■□□ 2.4
PTPN22Q9Y2R2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PTPN22Q9Y2R2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PTPN22Q9Y2R2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.05■■■□□ 2.4
PTPN22Q9Y2R2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.05■■■□□ 2.4
PTPN22Q9Y2R2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PTPN22Q9Y2R2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.04■■■□□ 2.4
PTPN22Q9Y2R2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.04■■■□□ 2.4
PTPN22Q9Y2R2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC30.03■■■□□ 2.4
PTPN22Q9Y2R2 U85056.1-201ENST00000616429 682 ntBASIC30.03■■■□□ 2.4
PTPN22Q9Y2R2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.02■■■□□ 2.4
PTPN22Q9Y2R2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PTPN22Q9Y2R2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PTPN22Q9Y2R2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
PTPN22Q9Y2R2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PTPN22Q9Y2R2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.99■■■□□ 2.39
PTPN22Q9Y2R2 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.99■■■□□ 2.39
PTPN22Q9Y2R2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PTPN22Q9Y2R2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PTPN22Q9Y2R2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.98■■■□□ 2.39
PTPN22Q9Y2R2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PTPN22Q9Y2R2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.97■■■□□ 2.39
PTPN22Q9Y2R2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PTPN22Q9Y2R2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.97■■■□□ 2.39
PTPN22Q9Y2R2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PTPN22Q9Y2R2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.96■■■□□ 2.39
PTPN22Q9Y2R2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
PTPN22Q9Y2R2 RARRES2P1-201ENST00000474487 481 ntBASIC29.95■■■□□ 2.39
PTPN22Q9Y2R2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.38
PTPN22Q9Y2R2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
PTPN22Q9Y2R2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PTPN22Q9Y2R2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.94■■■□□ 2.38
PTPN22Q9Y2R2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PTPN22Q9Y2R2 TSPY13P-201ENST00000338964 914 ntBASIC29.93■■■□□ 2.38
PTPN22Q9Y2R2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
PTPN22Q9Y2R2 LINC00273-201ENST00000539813 1452 ntBASIC29.92■■■□□ 2.38
PTPN22Q9Y2R2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
PTPN22Q9Y2R2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PTPN22Q9Y2R2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PTPN22Q9Y2R2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.9■■■□□ 2.38
PTPN22Q9Y2R2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
PTPN22Q9Y2R2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PTPN22Q9Y2R2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.89■■■□□ 2.38
PTPN22Q9Y2R2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PTPN22Q9Y2R2 AC004987.1-201ENST00000428627 508 ntBASIC29.88■■■□□ 2.37
PTPN22Q9Y2R2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PTPN22Q9Y2R2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PTPN22Q9Y2R2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.87■■■□□ 2.37
PTPN22Q9Y2R2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.86■■■□□ 2.37
PTPN22Q9Y2R2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
PTPN22Q9Y2R2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.86■■■□□ 2.37
PTPN22Q9Y2R2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PTPN22Q9Y2R2 ATP5G2P3-201ENST00000429083 425 ntBASIC29.85■■■□□ 2.37
PTPN22Q9Y2R2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.85■■■□□ 2.37
PTPN22Q9Y2R2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
PTPN22Q9Y2R2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PTPN22Q9Y2R2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.84■■■□□ 2.37
PTPN22Q9Y2R2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PTPN22Q9Y2R2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PTPN22Q9Y2R2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PTPN22Q9Y2R2 KRT18P60-201ENST00000312876 1297 ntBASIC29.82■■■□□ 2.36
PTPN22Q9Y2R2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.82■■■□□ 2.36
PTPN22Q9Y2R2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.82■■■□□ 2.36
PTPN22Q9Y2R2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.81■■■□□ 2.36
PTPN22Q9Y2R2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PTPN22Q9Y2R2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.81■■■□□ 2.36
PTPN22Q9Y2R2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.81■■■□□ 2.36
PTPN22Q9Y2R2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
PTPN22Q9Y2R2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.78■■■□□ 2.36
PTPN22Q9Y2R2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PTPN22Q9Y2R2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PTPN22Q9Y2R2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PTPN22Q9Y2R2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
PTPN22Q9Y2R2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.36
PTPN22Q9Y2R2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.76■■■□□ 2.36
PTPN22Q9Y2R2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.76■■■□□ 2.35
PTPN22Q9Y2R2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PTPN22Q9Y2R2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.75■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms