Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
HMG20BQ9P0W2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.77■■■□□ 2.68
HMG20BQ9P0W2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.77■■■□□ 2.68
HMG20BQ9P0W2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.77■■■□□ 2.68
HMG20BQ9P0W2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.77■■■□□ 2.68
HMG20BQ9P0W2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.76■■■□□ 2.67
HMG20BQ9P0W2 DUX4L11-201ENST00000611504 1267 ntBASIC31.76■■■□□ 2.67
HMG20BQ9P0W2 DUX4L12-201ENST00000614593 1267 ntBASIC31.76■■■□□ 2.67
HMG20BQ9P0W2 DUX4L14-201ENST00000621227 1267 ntBASIC31.76■■■□□ 2.67
HMG20BQ9P0W2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
HMG20BQ9P0W2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
HMG20BQ9P0W2 ST7-AS1-201ENST00000456775 1889 ntBASIC31.75■■■□□ 2.67
HMG20BQ9P0W2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
HMG20BQ9P0W2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.74■■■□□ 2.67
HMG20BQ9P0W2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
HMG20BQ9P0W2 HLA-V-202ENST00000446817 847 ntBASIC31.73■■■□□ 2.67
HMG20BQ9P0W2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.73■■■□□ 2.67
HMG20BQ9P0W2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HMG20BQ9P0W2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
HMG20BQ9P0W2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
HMG20BQ9P0W2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMG20BQ9P0W2 AC127502.1-201ENST00000399971 1502 ntBASIC31.71■■■□□ 2.67
HMG20BQ9P0W2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.71■■■□□ 2.67
HMG20BQ9P0W2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.71■■■□□ 2.67
HMG20BQ9P0W2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
HMG20BQ9P0W2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
HMG20BQ9P0W2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
HMG20BQ9P0W2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.7■■■□□ 2.66
HMG20BQ9P0W2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.69■■■□□ 2.66
HMG20BQ9P0W2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
HMG20BQ9P0W2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
HMG20BQ9P0W2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.67■■■□□ 2.66
HMG20BQ9P0W2 LINC00273-201ENST00000539813 1452 ntBASIC31.67■■■□□ 2.66
HMG20BQ9P0W2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.67■■■□□ 2.66
HMG20BQ9P0W2 MIR3648-2-201ENST00000581792 180 ntBASIC31.67■■■□□ 2.66
HMG20BQ9P0W2 MIR3648-1-201ENST00000615959 180 ntBASIC31.67■■■□□ 2.66
HMG20BQ9P0W2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
HMG20BQ9P0W2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
HMG20BQ9P0W2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.66■■■□□ 2.66
HMG20BQ9P0W2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.66■■■□□ 2.66
HMG20BQ9P0W2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
HMG20BQ9P0W2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
HMG20BQ9P0W2 CR559946.2-201ENST00000623684 991 ntBASIC31.65■■■□□ 2.66
HMG20BQ9P0W2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.65■■■□□ 2.66
HMG20BQ9P0W2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.64■■■□□ 2.66
HMG20BQ9P0W2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
HMG20BQ9P0W2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.64■■■□□ 2.65
HMG20BQ9P0W2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMG20BQ9P0W2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
HMG20BQ9P0W2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.63■■■□□ 2.65
HMG20BQ9P0W2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMG20BQ9P0W2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMG20BQ9P0W2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
HMG20BQ9P0W2 AC016575.1-201ENST00000607026 382 ntBASIC31.62■■■□□ 2.65
HMG20BQ9P0W2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
HMG20BQ9P0W2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
HMG20BQ9P0W2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.61■■■□□ 2.65
HMG20BQ9P0W2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
HMG20BQ9P0W2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
HMG20BQ9P0W2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
HMG20BQ9P0W2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 DUX4L13-201ENST00000554103 1267 ntBASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 DUX4L15-201ENST00000611059 1267 ntBASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 DUX4L23-201ENST00000615195 1269 ntBASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 DUX4L24-201ENST00000617576 1269 ntBASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 DUX4L22-201ENST00000618238 1269 ntBASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 DUX4L20-201ENST00000619712 1269 ntBASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 DUX4L21-201ENST00000622058 1269 ntBASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 DUX4L10-201ENST00000622460 1267 ntBASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 DUX4L25-201ENST00000624915 1269 ntBASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
HMG20BQ9P0W2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
HMG20BQ9P0W2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
HMG20BQ9P0W2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.57■■■□□ 2.64
HMG20BQ9P0W2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.57■■■□□ 2.64
HMG20BQ9P0W2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
HMG20BQ9P0W2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
HMG20BQ9P0W2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
HMG20BQ9P0W2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
HMG20BQ9P0W2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
HMG20BQ9P0W2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
HMG20BQ9P0W2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
HMG20BQ9P0W2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HMG20BQ9P0W2 MIR639-201ENST00000384974 98 ntBASIC31.55■■■□□ 2.64
HMG20BQ9P0W2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HMG20BQ9P0W2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
HMG20BQ9P0W2 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.54■■■□□ 2.64
HMG20BQ9P0W2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.53■■■□□ 2.64
HMG20BQ9P0W2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.53■■■□□ 2.64
HMG20BQ9P0W2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.53■■■□□ 2.64
HMG20BQ9P0W2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMG20BQ9P0W2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.52■■■□□ 2.64
HMG20BQ9P0W2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.52■■■□□ 2.64
HMG20BQ9P0W2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMG20BQ9P0W2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMG20BQ9P0W2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
HMG20BQ9P0W2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms