Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
CSNK1G1Q9HCP0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSNK1G1Q9HCP0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CSNK1G1Q9HCP0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.46■■□□□ 1.99
CSNK1G1Q9HCP0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.46■■□□□ 1.99
CSNK1G1Q9HCP0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CSNK1G1Q9HCP0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.45■■□□□ 1.98
CSNK1G1Q9HCP0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CSNK1G1Q9HCP0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.44■■□□□ 1.98
CSNK1G1Q9HCP0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.44■■□□□ 1.98
CSNK1G1Q9HCP0 LINC00273-201ENST00000539813 1452 ntBASIC27.44■■□□□ 1.98
CSNK1G1Q9HCP0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CSNK1G1Q9HCP0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CSNK1G1Q9HCP0 LINC01971-201ENST00000617888 1048 ntBASIC27.41■■□□□ 1.98
CSNK1G1Q9HCP0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CSNK1G1Q9HCP0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.39■■□□□ 1.98
CSNK1G1Q9HCP0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CSNK1G1Q9HCP0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CSNK1G1Q9HCP0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CSNK1G1Q9HCP0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CSNK1G1Q9HCP0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CSNK1G1Q9HCP0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.37■■□□□ 1.97
CSNK1G1Q9HCP0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CSNK1G1Q9HCP0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CSNK1G1Q9HCP0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.36■■□□□ 1.97
CSNK1G1Q9HCP0 ABCB10P1-201ENST00000614297 2181 ntBASIC27.33■■□□□ 1.97
CSNK1G1Q9HCP0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.33■■□□□ 1.97
CSNK1G1Q9HCP0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CSNK1G1Q9HCP0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.96
CSNK1G1Q9HCP0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.96
CSNK1G1Q9HCP0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 DUX4L11-201ENST00000611504 1267 ntBASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 DUX4L12-201ENST00000614593 1267 ntBASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 DUX4L14-201ENST00000621227 1267 ntBASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CSNK1G1Q9HCP0 AC135983.2-203ENST00000454486 1613 ntBASIC27.3■■□□□ 1.96
CSNK1G1Q9HCP0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CSNK1G1Q9HCP0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CSNK1G1Q9HCP0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.29■■□□□ 1.96
CSNK1G1Q9HCP0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CSNK1G1Q9HCP0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.29■■□□□ 1.96
CSNK1G1Q9HCP0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.28■■□□□ 1.96
CSNK1G1Q9HCP0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CSNK1G1Q9HCP0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
CSNK1G1Q9HCP0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.27■■□□□ 1.96
CSNK1G1Q9HCP0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CSNK1G1Q9HCP0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
CSNK1G1Q9HCP0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CSNK1G1Q9HCP0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CSNK1G1Q9HCP0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.25■■□□□ 1.95
CSNK1G1Q9HCP0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CSNK1G1Q9HCP0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CSNK1G1Q9HCP0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CSNK1G1Q9HCP0 WHAMMP2-203ENST00000563942 1603 ntBASIC27.24■■□□□ 1.95
CSNK1G1Q9HCP0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.24■■□□□ 1.95
CSNK1G1Q9HCP0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.24■■□□□ 1.95
CSNK1G1Q9HCP0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
CSNK1G1Q9HCP0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CSNK1G1Q9HCP0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.23■■□□□ 1.95
CSNK1G1Q9HCP0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.23■■□□□ 1.95
CSNK1G1Q9HCP0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 DUX4L13-201ENST00000554103 1267 ntBASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 DUX4L15-201ENST00000611059 1267 ntBASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 DUX4L23-201ENST00000615195 1269 ntBASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 DUX4L24-201ENST00000617576 1269 ntBASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 DUX4L22-201ENST00000618238 1269 ntBASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 DUX4L20-201ENST00000619712 1269 ntBASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 DUX4L21-201ENST00000622058 1269 ntBASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 DUX4L10-201ENST00000622460 1267 ntBASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 DUX4L25-201ENST00000624915 1269 ntBASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CSNK1G1Q9HCP0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CSNK1G1Q9HCP0 MIR3648-2-201ENST00000581792 180 ntBASIC27.21■■□□□ 1.95
CSNK1G1Q9HCP0 MIR3648-1-201ENST00000615959 180 ntBASIC27.21■■□□□ 1.95
CSNK1G1Q9HCP0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.2■■□□□ 1.95
CSNK1G1Q9HCP0 AP004833.2-201ENST00000532228 1454 ntBASIC27.2■■□□□ 1.95
CSNK1G1Q9HCP0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
CSNK1G1Q9HCP0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
CSNK1G1Q9HCP0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CSNK1G1Q9HCP0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CSNK1G1Q9HCP0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CSNK1G1Q9HCP0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
CSNK1G1Q9HCP0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
CSNK1G1Q9HCP0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
CSNK1G1Q9HCP0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CSNK1G1Q9HCP0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.19■■□□□ 1.94
CSNK1G1Q9HCP0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.19■■□□□ 1.94
CSNK1G1Q9HCP0 CR559946.2-201ENST00000623684 991 ntBASIC27.19■■□□□ 1.94
CSNK1G1Q9HCP0 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms