Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDH18Q9HCL0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.97■■□□□ 1.91
PCDH18Q9HCL0 AP006261.1-201ENST00000584783 668 ntBASIC26.97■■□□□ 1.91
PCDH18Q9HCL0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.97■■□□□ 1.91
PCDH18Q9HCL0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDH18Q9HCL0 MIR3665-201ENST00000578708 105 ntBASIC26.96■■□□□ 1.91
PCDH18Q9HCL0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDH18Q9HCL0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
PCDH18Q9HCL0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
PCDH18Q9HCL0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.93■■□□□ 1.9
PCDH18Q9HCL0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDH18Q9HCL0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDH18Q9HCL0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDH18Q9HCL0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDH18Q9HCL0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
PCDH18Q9HCL0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDH18Q9HCL0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
PCDH18Q9HCL0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDH18Q9HCL0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDH18Q9HCL0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDH18Q9HCL0 AL162393.1-201ENST00000437852 946 ntBASIC26.89■■□□□ 1.9
PCDH18Q9HCL0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDH18Q9HCL0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDH18Q9HCL0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
PCDH18Q9HCL0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH18Q9HCL0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH18Q9HCL0 MIR6090-201ENST00000622481 60 ntBASIC26.87■■□□□ 1.89
PCDH18Q9HCL0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH18Q9HCL0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
PCDH18Q9HCL0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH18Q9HCL0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
PCDH18Q9HCL0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH18Q9HCL0 AC108673.1-201ENST00000510422 1159 ntBASIC26.86■■□□□ 1.89
PCDH18Q9HCL0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH18Q9HCL0 AC087741.3-201ENST00000624270 1347 ntBASIC26.85■■□□□ 1.89
PCDH18Q9HCL0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH18Q9HCL0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH18Q9HCL0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.84■■□□□ 1.89
PCDH18Q9HCL0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
PCDH18Q9HCL0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH18Q9HCL0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDH18Q9HCL0 AP004833.2-201ENST00000532228 1454 ntBASIC26.82■■□□□ 1.88
PCDH18Q9HCL0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDH18Q9HCL0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH18Q9HCL0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.8■■□□□ 1.88
PCDH18Q9HCL0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH18Q9HCL0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH18Q9HCL0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH18Q9HCL0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDH18Q9HCL0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.77■■□□□ 1.88
PCDH18Q9HCL0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.76■■□□□ 1.88
PCDH18Q9HCL0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
PCDH18Q9HCL0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDH18Q9HCL0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.76■■□□□ 1.87
PCDH18Q9HCL0 DRD5P2-201ENST00000421395 2012 ntBASIC26.75■■□□□ 1.87
PCDH18Q9HCL0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDH18Q9HCL0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDH18Q9HCL0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.75■■□□□ 1.87
PCDH18Q9HCL0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDH18Q9HCL0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDH18Q9HCL0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDH18Q9HCL0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDH18Q9HCL0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDH18Q9HCL0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
PCDH18Q9HCL0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDH18Q9HCL0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDH18Q9HCL0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.71■■□□□ 1.87
PCDH18Q9HCL0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
PCDH18Q9HCL0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.7■■□□□ 1.86
PCDH18Q9HCL0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH18Q9HCL0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH18Q9HCL0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH18Q9HCL0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH18Q9HCL0 AC044849.2-201ENST00000606596 710 ntBASIC26.69■■□□□ 1.86
PCDH18Q9HCL0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDH18Q9HCL0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH18Q9HCL0 AC142086.6-201ENST00000621154 1765 ntBASIC26.69■■□□□ 1.86
PCDH18Q9HCL0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH18Q9HCL0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH18Q9HCL0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDH18Q9HCL0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH18Q9HCL0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH18Q9HCL0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH18Q9HCL0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDH18Q9HCL0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDH18Q9HCL0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH18Q9HCL0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.66■■□□□ 1.86
PCDH18Q9HCL0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH18Q9HCL0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
PCDH18Q9HCL0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
PCDH18Q9HCL0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH18Q9HCL0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
PCDH18Q9HCL0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.65■■□□□ 1.86
PCDH18Q9HCL0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDH18Q9HCL0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.65■■□□□ 1.86
PCDH18Q9HCL0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.64■■□□□ 1.86
PCDH18Q9HCL0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PCDH18Q9HCL0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.64■■□□□ 1.86
PCDH18Q9HCL0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDH18Q9HCL0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms