Protein–RNA interactions for Protein: Q9HBM1

SPC25, Kinetochore protein Spc25, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25Q9HBM1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SPC25Q9HBM1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SPC25Q9HBM1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SPC25Q9HBM1 AL161658.1-201ENST00000623641 1967 ntBASIC29.39■■■□□ 2.3
SPC25Q9HBM1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.39■■■□□ 2.3
SPC25Q9HBM1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
SPC25Q9HBM1 RARRES2P2-201ENST00000394842 485 ntBASIC29.38■■■□□ 2.29
SPC25Q9HBM1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.38■■■□□ 2.29
SPC25Q9HBM1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.36■■■□□ 2.29
SPC25Q9HBM1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.36■■■□□ 2.29
SPC25Q9HBM1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SPC25Q9HBM1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.35■■■□□ 2.29
SPC25Q9HBM1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.35■■■□□ 2.29
SPC25Q9HBM1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
SPC25Q9HBM1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPC25Q9HBM1 GPX1-201ENST00000419349 1106 ntBASIC29.34■■■□□ 2.29
SPC25Q9HBM1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.33■■■□□ 2.29
SPC25Q9HBM1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
SPC25Q9HBM1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.33■■■□□ 2.29
SPC25Q9HBM1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.32■■■□□ 2.28
SPC25Q9HBM1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.32■■■□□ 2.28
SPC25Q9HBM1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SPC25Q9HBM1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SPC25Q9HBM1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SPC25Q9HBM1 ABHD17AP5-201ENST00000580133 923 ntBASIC29.31■■■□□ 2.28
SPC25Q9HBM1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
SPC25Q9HBM1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SPC25Q9HBM1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SPC25Q9HBM1 AC010864.1-201ENST00000609407 1511 ntBASIC29.29■■■□□ 2.28
SPC25Q9HBM1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SPC25Q9HBM1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SPC25Q9HBM1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SPC25Q9HBM1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SPC25Q9HBM1 RNF126P1-201ENST00000567452 1320 ntBASIC29.27■■■□□ 2.28
SPC25Q9HBM1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SPC25Q9HBM1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.27■■■□□ 2.28
SPC25Q9HBM1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SPC25Q9HBM1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.26■■■□□ 2.27
SPC25Q9HBM1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
SPC25Q9HBM1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
SPC25Q9HBM1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SPC25Q9HBM1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.23■■■□□ 2.27
SPC25Q9HBM1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
SPC25Q9HBM1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SPC25Q9HBM1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SPC25Q9HBM1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
SPC25Q9HBM1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SPC25Q9HBM1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SPC25Q9HBM1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SPC25Q9HBM1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
SPC25Q9HBM1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
SPC25Q9HBM1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.21■■■□□ 2.27
SPC25Q9HBM1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
SPC25Q9HBM1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
SPC25Q9HBM1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
SPC25Q9HBM1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
SPC25Q9HBM1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.2■■■□□ 2.26
SPC25Q9HBM1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
SPC25Q9HBM1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
SPC25Q9HBM1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SPC25Q9HBM1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SPC25Q9HBM1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
SPC25Q9HBM1 AC008813.1-201ENST00000536597 885 ntBASIC29.17■■■□□ 2.26
SPC25Q9HBM1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.17■■■□□ 2.26
SPC25Q9HBM1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SPC25Q9HBM1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SPC25Q9HBM1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SPC25Q9HBM1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.15■■■□□ 2.26
SPC25Q9HBM1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
SPC25Q9HBM1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.14■■■□□ 2.26
SPC25Q9HBM1 AC022413.1-201ENST00000624602 984 ntBASIC29.14■■■□□ 2.26
SPC25Q9HBM1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.13■■■□□ 2.25
SPC25Q9HBM1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SPC25Q9HBM1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
SPC25Q9HBM1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.12■■■□□ 2.25
SPC25Q9HBM1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SPC25Q9HBM1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.11■■■□□ 2.25
SPC25Q9HBM1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
SPC25Q9HBM1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SPC25Q9HBM1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SPC25Q9HBM1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SPC25Q9HBM1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SPC25Q9HBM1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SPC25Q9HBM1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SPC25Q9HBM1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.07■■■□□ 2.24
SPC25Q9HBM1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
SPC25Q9HBM1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SPC25Q9HBM1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SPC25Q9HBM1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SPC25Q9HBM1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.04■■■□□ 2.24
SPC25Q9HBM1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SPC25Q9HBM1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
SPC25Q9HBM1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SPC25Q9HBM1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.04■■■□□ 2.24
SPC25Q9HBM1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SPC25Q9HBM1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SPC25Q9HBM1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SPC25Q9HBM1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SPC25Q9HBM1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SPC25Q9HBM1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms