Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
ATP6V0A4Q9HBG4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
ATP6V0A4Q9HBG4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.94■■■□□ 2.22
ATP6V0A4Q9HBG4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.94■■■□□ 2.22
ATP6V0A4Q9HBG4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
ATP6V0A4Q9HBG4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
ATP6V0A4Q9HBG4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
ATP6V0A4Q9HBG4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
ATP6V0A4Q9HBG4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
ATP6V0A4Q9HBG4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.93■■■□□ 2.22
ATP6V0A4Q9HBG4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.93■■■□□ 2.22
ATP6V0A4Q9HBG4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ATP6V0A4Q9HBG4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
ATP6V0A4Q9HBG4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
ATP6V0A4Q9HBG4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ATP6V0A4Q9HBG4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ATP6V0A4Q9HBG4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.9■■■□□ 2.22
ATP6V0A4Q9HBG4 AC127502.1-201ENST00000399971 1502 ntBASIC28.89■■■□□ 2.22
ATP6V0A4Q9HBG4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ATP6V0A4Q9HBG4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ATP6V0A4Q9HBG4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ATP6V0A4Q9HBG4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
ATP6V0A4Q9HBG4 MIR639-201ENST00000384974 98 ntBASIC28.87■■■□□ 2.21
ATP6V0A4Q9HBG4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
ATP6V0A4Q9HBG4 LINC01971-201ENST00000617888 1048 ntBASIC28.85■■■□□ 2.21
ATP6V0A4Q9HBG4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
ATP6V0A4Q9HBG4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.84■■■□□ 2.21
ATP6V0A4Q9HBG4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.84■■■□□ 2.21
ATP6V0A4Q9HBG4 MIR4449-201ENST00000578365 66 ntBASIC28.84■■■□□ 2.21
ATP6V0A4Q9HBG4 MIR3648-2-201ENST00000581792 180 ntBASIC28.84■■■□□ 2.21
ATP6V0A4Q9HBG4 MIR3648-1-201ENST00000615959 180 ntBASIC28.84■■■□□ 2.21
ATP6V0A4Q9HBG4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
ATP6V0A4Q9HBG4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.83■■■□□ 2.21
ATP6V0A4Q9HBG4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.83■■■□□ 2.21
ATP6V0A4Q9HBG4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.83■■■□□ 2.21
ATP6V0A4Q9HBG4 DUX4L11-201ENST00000611504 1267 ntBASIC28.83■■■□□ 2.21
ATP6V0A4Q9HBG4 DUX4L12-201ENST00000614593 1267 ntBASIC28.83■■■□□ 2.21
ATP6V0A4Q9HBG4 DUX4L14-201ENST00000621227 1267 ntBASIC28.83■■■□□ 2.21
ATP6V0A4Q9HBG4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.83■■■□□ 2.21
ATP6V0A4Q9HBG4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
ATP6V0A4Q9HBG4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.82■■■□□ 2.2
ATP6V0A4Q9HBG4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.81■■■□□ 2.2
ATP6V0A4Q9HBG4 LINC00273-201ENST00000539813 1452 ntBASIC28.81■■■□□ 2.2
ATP6V0A4Q9HBG4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.81■■■□□ 2.2
ATP6V0A4Q9HBG4 AC016575.1-201ENST00000607026 382 ntBASIC28.81■■■□□ 2.2
ATP6V0A4Q9HBG4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.81■■■□□ 2.2
ATP6V0A4Q9HBG4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ATP6V0A4Q9HBG4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.79■■■□□ 2.2
ATP6V0A4Q9HBG4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ATP6V0A4Q9HBG4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
ATP6V0A4Q9HBG4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ATP6V0A4Q9HBG4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ATP6V0A4Q9HBG4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.78■■■□□ 2.2
ATP6V0A4Q9HBG4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
ATP6V0A4Q9HBG4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
ATP6V0A4Q9HBG4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.76■■■□□ 2.19
ATP6V0A4Q9HBG4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
ATP6V0A4Q9HBG4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
ATP6V0A4Q9HBG4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.75■■■□□ 2.19
ATP6V0A4Q9HBG4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ATP6V0A4Q9HBG4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.74■■■□□ 2.19
ATP6V0A4Q9HBG4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.74■■■□□ 2.19
ATP6V0A4Q9HBG4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ATP6V0A4Q9HBG4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.74■■■□□ 2.19
ATP6V0A4Q9HBG4 CR559946.2-201ENST00000623684 991 ntBASIC28.73■■■□□ 2.19
ATP6V0A4Q9HBG4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.73■■■□□ 2.19
ATP6V0A4Q9HBG4 ABCB10P1-201ENST00000614297 2181 ntBASIC28.72■■■□□ 2.19
ATP6V0A4Q9HBG4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.72■■■□□ 2.19
ATP6V0A4Q9HBG4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.72■■■□□ 2.19
ATP6V0A4Q9HBG4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
ATP6V0A4Q9HBG4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
ATP6V0A4Q9HBG4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ATP6V0A4Q9HBG4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
ATP6V0A4Q9HBG4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ATP6V0A4Q9HBG4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
ATP6V0A4Q9HBG4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
ATP6V0A4Q9HBG4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
ATP6V0A4Q9HBG4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ATP6V0A4Q9HBG4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.68■■■□□ 2.18
ATP6V0A4Q9HBG4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ATP6V0A4Q9HBG4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ATP6V0A4Q9HBG4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V0A4Q9HBG4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V0A4Q9HBG4 AC135983.2-203ENST00000454486 1613 ntBASIC28.65■■■□□ 2.18
ATP6V0A4Q9HBG4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V0A4Q9HBG4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V0A4Q9HBG4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.65■■■□□ 2.18
ATP6V0A4Q9HBG4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.65■■■□□ 2.18
ATP6V0A4Q9HBG4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
ATP6V0A4Q9HBG4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
ATP6V0A4Q9HBG4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.63■■■□□ 2.17
ATP6V0A4Q9HBG4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
ATP6V0A4Q9HBG4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
ATP6V0A4Q9HBG4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
ATP6V0A4Q9HBG4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ATP6V0A4Q9HBG4 WHAMMP2-203ENST00000563942 1603 ntBASIC28.62■■■□□ 2.17
ATP6V0A4Q9HBG4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ATP6V0A4Q9HBG4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
ATP6V0A4Q9HBG4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ATP6V0A4Q9HBG4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms